Personal tools

MacroAPE 1083:TGACCAA,motif340

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: TGACCAA,motif340,CNhs13492,T:2566.0(44.22%),B:28874.8(36.21%),P:1e-35

Motif matrix
POACGT
12.5662.5662.5662558.302
212.832.5662055.366495.238
32314.532246.3362.5662.566
42.5662186.232374.6362.566
5377.2022183.6662.5662.566
62558.3022.5662.5662.566
72558.3022.5662.5662.566

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

HAP2#MA0313.1-20.001613660.7681040.8772565TGACCAAACCAA-
MAC1#MA0326.100.001842970.8772560.8772567TGACCAATGAGCAAA-
RORA_2#MA0072.110.006531773.1091217TGACCAATTGACCTACTTATA-
PPARG#MA0066.1110.006879173.2744917TGACCAAGTAGGTCACGGTGACCTACT+
HAP3#MA0314.130.01234085.874217TGACCAATCTGAACCAATCAGA-
NFE2L2#MA0150.110.01484567.0665117TGACCAAATGACTCAGCA+
NFYA#MA0060.120.01929449.1841217TGACCAACTCAGCCAATCAGCGC+
RORA_1#MA0071.100.02012539.5796517TGACCAATGACCTTGAT-