Personal tools

MacroAPE 1083:TTCTGCACC,motif618

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: TTCTGCACC,motif618,CNhs11988,T:1281.0(40.87%),B:23036.0(31.12%),P:1e-30

Motif matrix
POACGT
156.36480.70351.241092.693
274.29897.35681.9841027.362
337.1491052.98279.422111.447
4125.538138.34864.05953.064
5107.604192.15895.41985.827
692.232964.593166.5357.645
7962.031114.00926.901178.059
842.2731008.147122.976107.604
990.9511022.23824.339143.472

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

REST#MA0138.200.0006855490.3263210.6526439TTCTGCACCTTCAGCACCATGGACAGCGCC+
AFT1#MA0269.150.006788373.2312619TTCTGCACCTTACATATTGCACCCGATTGG+
PHD1#MA0355.100.006795263.2345419TTCTGCACCTGCTGCAGGT-
DOT6#MA0351.100.007974793.79619TTCTGCACCTTCTGCACCTCATCGCATCCT+
REST#MA0138.2-10.008602324.094718TTCTGCACCTCAGCACCATGGACAGCGC-
RDR1#MA0360.110.01073355.1091417TTCTGCACCGTTCCGCA-
GAL4#MA0299.150.01580327.5223119TTCTGCACCGAGTACTGTTCCCCG-
CHA4#MA0283.1-10.01971639.3849818TTCTGCACCTCTCCGCC-