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NonredundantMotifs:102

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Representative Motif


Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon
May 2013, Collection Name: Non-redundant known motifs
Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.
207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name  :non-redundant102
  • db  :UNIPROBE
  • Id  :Tcfap2c_secondary
  • name  :SCI09
  • score  :0.931218572863686
  • External refs:
EntrezGene:7022
UniProt:7022

  • Internal refs:
EntrezGene:7022


Motif matrix
P0ACGT
10.2030425426933860.3480708479442920.227399277650760.221487331711562
20.1792908513115180.3963922095878960.1443826455101490.279934293590437
30.09342130232336050.03354007659754220.8590045061043270.0140341149747703
40.1813732605464830.6937236103968970.03148135581185430.0934217732447653
50.01906496113313920.8407204711590230.01162183971103970.128592727996798
60.1974210302574360.5010997195765750.08760634707711810.213872903088871
70.4572856578739050.06330453163118390.2394991722245490.239910638270362
80.5089842327899010.1433245455264590.1162282006099830.231463021073657
90.2138729030888710.08760634707711810.5010997195765750.197421030257436
100.1285927279967980.01162183971103970.8407204711590230.0190649611331392
110.09342177324476530.03148135581185430.6937236103968970.181373260546483
120.01403411497477030.8590045061043270.03354007659754220.0934213023233605
130.4777408047688560.05942514508074270.1653562610329840.297477789117417
140.2786582024621790.1360109050557460.3112914420314760.2740394504506

Sub Motif Members