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NonredundantMotifs:107

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant107
  • db :HOCOMOCO
  • Id :FOXM1_f1
  • name :
  • score :0.08165116359994255
  • External refs:
EntrezGene:2305
UniProt:2305

  • Internal refs:
EntrezGene:2305


Motif matrix
P0ACGT
11.2690476190476193.37380952380951674.3642857142857183.992857142857141
20.01.98095238095237611.98095238095237619.038095238095234
33.0952380952380940.00.99047619047619058.914285714285718
42.1047619047619061.1142857142857148.6666666666666711.114285714285714
56.3142857142857180.00.06.685714285714282
60.01.98095238095237614.2095238095238126.809523809523811
70.01.1142857142857140.011.885714285714283
82.1047619047619061.1142857142857149.7809523809523760.0
93.9619047619047650.99047619047619051.1142857142857146.933333333333329
100.00.00.990476190476190512.009523809523811
110.01.1142857142857141.98095238095237619.904761904761905
124.2095238095238122.1047619047619060.8666666666666675.819047619047624
130.655.726190476190470.655.97380952380953

Sub Motif Members