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NonredundantMotifs:109

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant109
  • db :HOCOMOCO
  • Id :SPZ1_f1
  • name :
  • score :0.8153778359751451
  • External refs:
EntrezGene:84654
UniProt:84654

  • Internal refs:
EntrezGene:84654


Motif matrix
P0ACGT
12.4999999999999975.51.4999999999999961.499999999999996
20.02.00000000000000187.99999999999999640.9999999999999999
32.00000000000000180.99999999999999997.99999999999999640.0
40.06.99999999999999643.00000000000000270.9999999999999999
52.00000000000000180.03.00000000000000275.999999999999995
60.99999999999999990.07.99999999999999642.0000000000000018
74.00000000000000360.00.06.9999999999999964
85.0000000000000040.00.05.999999999999995
96.99999999999999643.00000000000000270.99999999999999990.0
100.99999999999999998.9999999999999980.99999999999999990.0
113.00000000000000275.9999999999999952.00000000000000180.0
120.05.0000000000000043.00000000000000273.0000000000000027
132.00000000000000183.00000000000000270.99999999999999995.000000000000004
140.02.00000000000000186.99999999999999642.0000000000000018
150.00.99999999999999999.9999999999999980.0
161.74999999999999911.74999999999999915.75000000000000361.7499999999999991

Sub Motif Members