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NonredundantMotifs:111

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant111
  • db :HOMER
  • Id :PBX1_MCF7-PBX1-ChIP-Seq(GSE28007)
  • name :
  • score :0.0635317205896486
  • External refs:
EntrezGene:5087
UniProt:5087

  • Internal refs:
EntrezGene:5087


Motif matrix
POACGT
11632960384
2747037626
3186891
41911858
5118761
63651810
7187521
88622114
92504351904
1011412852
11287331
128602116

Sub Motif Members