Personal tools

NonredundantMotifs:133

From FANTOM5_SSTAR

Jump to: navigation, search

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant133
  • db :UNIPROBE
  • Id :Zbtb12_secondary
  • name :SCI09
  • score :0.060040699417635734
  • External refs:
EntrezGene:221527
UniProt:221527

  • Internal refs:
EntrezGene:221527


Motif matrix
P0ACGT
10.3041974586438250.2182964593241480.148292893066430.329213188965597
20.2994116043905380.2736567270205530.2198639596189890.207067708969921
30.1729382775804830.2196643932118330.1400609291793540.46733640002833
40.04355739806659350.6628001031520970.161771195005860.13187130377545
50.440075191702510.1905508996225270.3516705031501430.0177034055248198
60.1220625606275620.02857216916878680.08254206519775030.766823205005901
70.03808012839103990.0308595296025940.03928932359658770.891771018409778
80.9222970789034240.01649080002826850.0393281259556920.0218839951126153
90.01891303454951080.01218213882588650.9392307275216080.0296740991029942
100.953032095594820.01557846287637750.01242522860700360.018964212921799
110.9376818389716810.03178174927587050.008057891400546280.0224785203519022
120.03369708737472970.9292883257293810.0141500858138380.0228645010820514
130.1701327457200890.247544076288960.3281667586863310.25415641930462
140.100596497148820.4657363594866050.1106513322004310.323015811164145
150.2128471804634670.1508884489621650.1728255050337420.463438865540626

Sub Motif Members