NonredundantMotifs:145

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant145
• db :UNIPROBE
• Id :Arid5a_secondary
• name :SCI09
• score :0.010689289860944869
  
• External refs:

EntrezGene:10865
UniProt:10865

• Internal refs:

EntrezGene:10865

Motif matrix

P0 A C G T 1 0.171818474794893 0.301056158269957 0.272983710858808 0.254141656076342 2 0.302395808449779 0.167175520870631 0.303663804996695 0.226764865682895 3 0.143417743379079 0.268924854357836 0.0925163619061908 0.495141040356894 4 0.279634036258407 0.190553864351617 0.254921512922246 0.27489058646773 5 0.282521793091176 0.364494257325439 0.178653788678072 0.174330160905313 6 0.67180794910238 0.0580293024285749 0.0596476368157696 0.210515111653276 7 0.834274386241542 0.0732992285220956 0.0527562068364571 0.0396701783999056 8 0.0374260265202901 0.0541624682468082 0.0972876506622248 0.811123854570677 9 0.781687011470387 0.119873477031243 0.0595360771638669 0.0389034343345037 10 0.094411302375252 0.739417658113489 0.148945962228046 0.0172250772832127 11 0.121495542183723 0.182463683422598 0.688059185511045 0.00798158888263429 12 0.531845124553274 0.0585129870779191 0.264994447871685 0.144647440497122 13 0.406274049878601 0.102159448175403 0.285680702665462 0.205885799280533 14 0.434643007022191 0.139451979646365 0.187266769412023 0.238638243919421 15 0.151869112283505 0.281521051645057 0.246109594746648 0.32050024132479 16 0.351313940798544 0.200542211760488 0.276808714681745 0.171335132759223 17 0.442449108531442 0.213938960974302 0.210894821994709 0.132717108499547