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NonredundantMotifs:151

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant151
  • db :HOCOMOCO
  • Id :MCR_f1
  • name :
  • score :0.11283213043446465
  • External refs:
EntrezGene:4306
UniProt:4306

  • Internal refs:
EntrezGene:4306


Motif matrix
P0ACGT
12.7222222222222231.72222222222222190.7222222222222211.833333333333334
24.8888888888888870.00.02.1111111111111143
30.88888888888888910.06.1111111111111110.0
42.8888888888888910.02.00000000000000182.1111111111111143
53.222222222222222.8888888888888910.88888888888888910.0
60.05.2222222222222220.88888888888888910.8888888888888891
74.1111111111111160.00.02.888888888888891
81.38888888888888621.1666666666666694.1666666666666650.2777777777777779
91.1666666666666691.38888888888888624.1666666666666650.2777777777777779
101.2777777777777810.27777777777777790.27777777777777795.166666666666666
110.01.1111111111111131.77777777777777814.111111111111116
121.1111111111111130.05.8888888888888940.0
133.1111111111111080.00.03.888888888888892
142.00000000000000180.02.00000000000000183.000000000000003
150.02.11111111111111434.8888888888888870.0
160.88888888888888910.02.00000000000000184.111111111111116
173.2777777777777760.27777777777777792.2777777777777751.166666666666669

Sub Motif Members