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NonredundantMotifs:155

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant155
  • db :HOCOMOCO
  • Id :FOXC2_f1
  • name :
  • score :0.1470267923943343
  • External refs:
EntrezGene:2303
UniProt:2303

  • Internal refs:
EntrezGene:2303


Motif matrix
P0ACGT
10.2678571428571430.2678571428571433.1251.339285714285715
21.071428571428571.071428571428570.02.857142857142855
30.01.071428571428570.03.92857142857143
40.00.00.05.0
51.071428571428570.03.928571428571430.0
60.00.00.05.0
70.00.00.05.0
81.071428571428570.01.071428571428572.857142857142855
91.7857142857142850.00.03.2142857142857153
100.01.7857142857142853.21428571428571530.0
111.071428571428572.1428571428571450.01.785714285714285
120.03.21428571428571530.01.785714285714285
135.00.00.00.0
140.00.7142857142857154.2857142857142850.0
152.41071428571428470.2678571428571431.3392857142857150.982142857142855

Sub Motif Members