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NonredundantMotifs:156

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant156
  • db :HOCOMOCO
  • Id :EPAS1_si
  • name :
  • score :0.664673842150266
  • External refs:
EntrezGene:2034
UniProt:2034

  • Internal refs:
EntrezGene:2034


Motif matrix
P0ACGT
10.01.11796361298230169.316887328842481.565149058175228
21.5651490581752280.02.5713163098592927.86353463196548
32.1241308646663680.09.8758691353336320.0
43.62734546233922833.73914182363746761.4533526968769883.1801600171463162
54.2981236301286080.07.701876369871380.0
60.02.012334503368141.11796361298230168.869701883649554
76.9193018407837710.05.0806981592162280.0
80.07.813672731169623.62734546233922830.5589818064911508
90.00.012.00.0
101.5651490581752280.00.010.434850941824772
110.02.45951994856106378.4225164384566331.1179636129823016
120.55898180649115081.78874178077168396.0249309503979363.6273454623392283
130.01.45335269687698810.5466473031230130.0

Sub Motif Members