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NonredundantMotifs:159

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant159
  • db :HOCOMOCO
  • Id :PURA_f1
  • name :
  • score :3.9404484733511236
  • External refs:
EntrezGene:5813
UniProt:5813

  • Internal refs:
EntrezGene:5813


Motif matrix
P0ACGT
12.0681818181818171.14898989898989928.6338383838383821.1489898989898992
21.96969696969696280.787878787878787810.2424242424242440.0
36.69696969696969550.01.96969696969696284.333333333333329
45.5151515151515122.49494949494949573.93939393939393861.0505050505050504
50.91919191919191910.06.69696969696969555.383838383838381
60.91919191919191911.8383838383838336.0404040404040454.202020202020199
70.01.96969696969696288.1414141414141382.8888888888888857
81.18181818181818170.09.9797979797979831.838383838383833
92.7575757575757561.96969696969696284.2020202020201994.070707070707069
102.2323232323232360.07.6161616161616183.151515151515146
110.00.010.5050505050505032.4949494949494957
120.91919191919191912.88888888888888577.8787878787878771.313131313131313
132.10101010101010578.929292929292931.96969696969696280.0
145.6464646464646423.0202020202020164.3333333333333290.0
150.91919191919191910.06.8282828282828245.252525252525252
164.0707070707070690.08.929292929292930.0
170.459595959595958841.3787878787878789.5202020202020171.6414141414141379

Sub Motif Members