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NonredundantMotifs:16

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Representative Motif


Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon
May 2013, Collection Name: Non-redundant known motifs
Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.
207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name  :non-redundant16
  • db  :HOCOMOCO
  • Id  :CEBPB_f1
  • name  :
  • score  :0.6507758725357089
  • External refs:
EntrezGene:1051
UniProt:1051

  • Internal refs:
EntrezGene:1051


Motif matrix
P0ACGT
1505.45833122858005207.5093476383388553.050789544047149.929503434375135
29.81974525190819710.8883485734281751.92474334811294231293.3151346718905
311.9748529881392082.4798384244303757485.2814003005542816.2118801322162
4418.2659633927159518.828238834951268610.4346480460513268.41912157162176
5182.94319712755836303.4928073738461186.79100670994978642.720960633987
65.53363712582469811.9342302644797851294.07732534686494.402779108170397
7159.09917413129451043.189280604277412.87743293575687100.78208417400876
81295.036387750092216.4618101628434770.04.449773932404013
91306.05708412597125.0238597599059764.86702795946304350.0
1072.58169560641501356.98371372799676215.90862125703686670.4739412538929

Sub Motif Members