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NonredundantMotifs:160

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant160
  • db :HOCOMOCO
  • Id :TEF_f1
  • name :
  • score :0.06128254407081912
  • External refs:
EntrezGene:7008
UniProt:7008

  • Internal refs:
EntrezGene:7008


Motif matrix
P0ACGT
10.67647058823529361.8529411764705940.676470588235293610.794117647058815
22.1176470588235340.010.7058823529411741.1764705882352948
33.1764705882352941.05882352941176432.94117647058822976.823529411764702
40.00.00.014.0
53.1764705882352940.03.41176470588235777.411764705882348
613.176470588235290.00.82352941176470570.0
71.05882352941176433.88235294117647230.09.058823529411768
84.3529411764705860.08.8235294117647050.8235294117647057
90.00.58823529411764742.11764705882353411.29411764705882
108.7058823529411723.41176470588235771.05882352941176430.8235294117647057
119.7647058823529460.02.1176470588235342.117647058823534
125.9999999999999924.3529411764705862.5882352941176481.0588235294117643
130.58823529411764742.82352941176471232.1176470588235348.470588235294121
142.5294117647058820.41176470588235225.941176470588245.11764705882353

Sub Motif Members