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NonredundantMotifs:17

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Representative Motif


Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon
May 2013, Collection Name: Non-redundant known motifs
Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.
207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name  :non-redundant17
  • db  :JASPAR
  • Id  :MA0035.2
  • name  :Gata1
  • score  :0.20747286391586373
  • External refs:
EntrezGene:2623
UniProt:2623

  • Internal refs:
EntrezGene:2623


Motif matrix
P0ACGT
114235601242775
270816331235424
3278231101177
40040000
54000000
627291093835
7388706107
83550438363
97996812296224
1014328971360311
1114878291099585

Sub Motif Members