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NonredundantMotifs:177

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant177
  • db :HOCOMOCO
  • Id :NR2E3_f1
  • name :
  • score :0.11236361080472342
  • External refs:
EntrezGene:10002
UniProt:10002

  • Internal refs:
EntrezGene:10002


Motif matrix
P0ACGT
111.3408408408408393.5000000000000014.2777777777777843.500000000000001
218.729729729729731.55555555555555421.55555555555555420.7777777777777761
317.7627627627627620.77777777777777613.30030030030029840.7777777777777761
41.55555555555555421.555555555555554216.3963963963963833.1111111111111085
51.55555555555555420.02.333333333333326418.72972972972973
61.555555555555554220.2852852852852730.77777777777777610.0
721.063063063063060.00.77777777777777610.7777777777777761
817.951951951951953.11111111111110851.55555555555555420.0
921.840840840840840.00.00.7777777777777761
1018.540540540540520.03.30030030030029840.7777777777777761
115.6336336336336241.555555555555554213.8738738738738671.5555555555555542
120.77777777777777611.55555555555555424.66666666666665315.6186186186186
133.111111111111108515.61861861861862.33333333333332641.5555555555555542
1416.5908408408408263.3055555555555551.74999999999999780.9722222222222218

Sub Motif Members