NonredundantMotifs:178

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant178
• db :HOCOMOCO
• Id :PAX8_f1
• name  :
• score :0.14282671296680755
  
• External refs:

EntrezGene:7849
UniProt:7849

• Internal refs:

EntrezGene:7849

Motif matrix

P0 A C G T 1 4.2923940149626025 7.8273067331671 14.672693266832917 10.127805486284279 2 3.0299251870324215 8.24812967581048 3.534912718204489 22.107231920199496 3 9.089775561097277 14.0274314214464 11.783042394014977 2.0199501246882803 4 30.748129675810496 2.5810473815461337 2.0199501246882803 1.5710723192019957 5 5.049875311720709 16.608478802992508 0.0 15.261845386533679 6 2.524937655860351 5.89152119700747 1.5710723192019957 26.93266832917707 7 3.1421446384039915 16.15960099750623 16.608478802992508 1.009975062344142 8 17.169576059850375 2.1321695760598494 14.476309226932676 3.1421446384039915 9 15.822942643391507 12.119700748129667 4.937655860349122 4.039900249376568 10 1.009975062344142 8.304239401496273 25.081047381546163 2.524937655860351 11 5.274314214463847 19.526184538653382 0.0 12.119700748129667 12 14.364089775561087 4.039900249376568 18.516209476309246 0.0 13 0.0 3.591022443890276 16.832917705735646 16.49625935162096 14 12.708852867830426 2.0480049875311734 16.07543640897758 6.087905236907748