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NonredundantMotifs:183

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant183
  • db :HOCOMOCO
  • Id :PROP1_f1
  • name :
  • score :0.029623839784875226
  • External refs:
EntrezGene:5626
UniProt:5626

  • Internal refs:
EntrezGene:5626


Motif matrix
P0ACGT
12.2752808988764051.2640449438202234.1966292134831491.264044943820223
26.9775280898876440.00.02.022471910112364
30.03.03370786516853745.96629213483146350.0
43.03370786516853741.9213483146067441.0112359550561823.0337078651685374
56.9775280898876441.0112359550561820.01.011235955056182
66.9775280898876440.01.0112359550561821.011235955056182
72.0224719101123640.01.0112359550561825.9662921348314635
80.01.0112359550561820.07.988764044943817
95.96629213483146351.0112359550561821.0112359550561821.011235955056182
107.9887640449438171.0112359550561820.00.0
112.0224719101123642.0224719101123641.0112359550561823.943820224719099
126.0674157303370840.00.02.932584269662926
131.9213483146067440.00.07.078651685393256
143.9438202247190992.0224719101123643.03370786516853740.0
153.5393258426966280.50561797752809013.4382022471910081.5168539325842731

Sub Motif Members