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NonredundantMotifs:185

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant185
  • db :HOCOMOCO
  • Id :TGIF1_f1
  • name :
  • score :0.14640978168080532
  • External refs:
EntrezGene:7050
UniProt:7050

  • Internal refs:
EntrezGene:7050


Motif matrix
P0ACGT
12.4677419354838781.48064516129032692.4677419354838786.525806451612916
20.98709677419355120.010.9677419354838970.9870967741935512
30.98709677419355120.03.9483870967742058.006451612903243
40.07.8967741935483974.0580645161290380.9870967741935512
59.9806451612903460.98709677419355120.01.9741935483871025
61.97419354838710252.08387096774193566.9096774193548591.9741935483871025
71.97419354838710252.08387096774193566.9096774193548591.9741935483871025
82.96129032258065370.00.09.980645161290346
90.98709677419355121.97419354838710259.9806451612903460.0
102.96129032258065370.01.97419354838710258.006451612903243
110.08.8838709677419472.08387096774193561.9741935483871025
128.9935483870967940.03.9483870967742050.0
131.97419354838710255.0451612903225893.9483870967742051.9741935483871025
140.98709677419355128.0064516129032431.97419354838710251.9741935483871025
152.96129032258065371.97419354838710251.97419354838710256.0322580645161405
161.48064516129032692.4677419354838785.5387096774193653.4548387096774293

Sub Motif Members