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NonredundantMotifs:189

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant189
  • db :HOCOMOCO
  • Id :AIRE_f2
  • name :
  • score :0.050140673277554296
  • External refs:
EntrezGene:326
UniProt:326

  • Internal refs:
EntrezGene:326


Motif matrix
P0ACGT
116.42857142857148410.7959183673469535.16326530612246258.918367346938803
27.510204081632687.510204081632685.63265306122448920.65306122448985
35.6326530612244895.6326530612244898.44897959183677621.591836734693906
41.8775510204081660.036.6122448979592652.8163265306122534
50.00.033.795918367346987.51020408163268
613.142857142857171.8775510204081660.93877551020408325.346938775510242
715.9591836734694153.7551020408163360.93877551020408320.65306122448985
815.020408163265365.6326530612244895.63265306122448915.02040816326536
914.0816326530612652.81632653061225345.63265306122448918.775510204081698
1021.5918367346939453.7551020408163365.63265306122448910.326530612244925
1115.9591836734694151.8775510204081662.816326530612253420.65306122448985
129.387755102040835.6326530612244892.816326530612253423.469387755102094
130.00.93877551020408336.6122448979592653.755102040816336
140.00.040.367346938775560.938775510204083
159.387755102040833.75510204081633610.32653061224492517.836734693877606
162.81632653061225347.510204081632687.5102040816326823.469387755102094
1718.775510204081660.9387755102040836.57142857142858515.02040816326536
1816.66326530612249711.0306122448980064.459183673469389.153061224489816

Sub Motif Members