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NonredundantMotifs:192

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant192
  • db :HOCOMOCO
  • Id :HESX1_f1
  • name :
  • score :0.8649196242972365
  • External refs:
EntrezGene:8820
UniProt:8820

  • Internal refs:
EntrezGene:8820


Motif matrix
P0ACGT
13.5142857142857121.5714285714285681.4571428571428561.457142857142856
20.02.0571428571428562.8571428571428563.085714285714288
30.04.1142857142857123.8857142857142880.0
41.0285714285714324.1142857142857120.02.857142857142856
50.00.08.00.0
61.1428571428571440.05.8285714285714321.028571428571432
71.0285714285714326.9714285714285680.00.0
83.8857142857142881.0285714285714320.03.085714285714288
93.24.80.00.0
102.1714285714285681.0285714285714323.7714285714285681.028571428571432
110.00.9142857142857120.07.085714285714288
123.0857142857142880.03.7714285714285681.142857142857144
132.9714285714285680.9142857142857124.1142857142857120.0
142.1714285714285683.7714285714285681.0285714285714321.028571428571432
152.9714285714285683.0857142857142880.9142857142857121.028571428571432
160.25714285714285681.2857142857142881.1714285714285685.285714285714288

Sub Motif Members