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NonredundantMotifs:193

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant193
  • db :HOCOMOCO
  • Id :BHE41_f1
  • name :
  • score :2.4300446971681233
  • External refs:
EntrezGene:79365
UniProt:79365

  • Internal refs:
EntrezGene:79365


Motif matrix
P0ACGT
13.840206185567010.74742268041237091.675257731958763.73711340206186
20.05.876288659793824.123711340206190.0
32.989690721649483.09278350515463972.989690721649480.927835051546392
44.020618556701031.03092783505154984.948453608247420.0
51.03092783505154981.03092783505154984.123711340206193.8144329896907196
60.04.020618556701034.948453608247421.0309278350515498
70.04.948453608247420.05.051546391752581
80.010.00.00.0
97.1134020618556710.01.958762886597940.927835051546392
102.061855670103095.979381443298970.9278350515463921.0309278350515498
110.01.03092783505154988.041237113402060.927835051546392
120.00.00.010.0
130.00.010.00.0
143.09278350515463975.979381443298970.9278350515463920.0
154.123711340206191.958762886597941.03092783505154982.8865979381443303
160.00.9278350515463927.1134020618556711.95876288659794
174.948453608247421.958762886597943.09278350515463970.0
184.020618556701030.9278350515463924.020618556701031.0309278350515498
193.09278350515463971.03092783505154985.876288659793820.0
202.319587628865983.24742268041237033.24742268041237031.18556701030928

Sub Motif Members