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NonredundantMotifs:198

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant198
  • db :HOCOMOCO
  • Id :BRAC_si
  • name :
  • score :0.01156226174353107
  • External refs:
EntrezGene:6862
UniProt:6862

  • Internal refs:
EntrezGene:6862


Motif matrix
P0ACGT
112.749999999999992.7500000000000068.7500000000000121.75
24.000000000000003613.08.0000000000000071.0000000000000009
321.000000000000011.00000000000000091.00000000000000092.9999999999999902
48.9999999999999951.00000000000000091.000000000000000915.000000000000002
515.0000000000000020.00.010.999999999999998
68.0000000000000070.017.0000000000000041.0000000000000009
70.00.00.026.0
82.99999999999999024.99999999999999217.999999999999990.0
926.00.00.00.0
100.026.00.00.0
1126.00.00.00.0
120.025.000000000000010.01.0000000000000009
130.024.01.00000000000000091.0000000000000009
140.00.00.026.0
1526.00.00.00.0
160.01.999999999999999324.00.0
170.01.000000000000000925.000000000000010.0
180.01.00000000000000090.025.00000000000001
190.00.026.00.0
201.00000000000000091.00000000000000090.024.0
210.06.99999999999999417.0000000000000041.9999999999999993
2225.000000000000010.00.01.0000000000000009
2321.9999999999999961.99999999999999931.00000000000000091.0000000000000009
2421.9999999999999960.02.99999999999999021.0000000000000009
256.52.50000000000000132.500000000000001314.500000000000009

Sub Motif Members