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NonredundantMotifs:20

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant20
  • db :HOCOMOCO
  • Id :CREB1_f1
  • name :
  • score :0.4550053399821507
  • External refs:
EntrezGene:1385
UniProt:1385

  • Internal refs:
EntrezGene:1385


Motif matrix
P0ACGT
168.9723479873165557.30914483367757132.8807612124659826.51473889732101
20.00.78960015221427230.6141334517222098284.27325932684454
30.7018668019682410.0280.58845861651124.386667512301503
4283.39592582438410.7018668019682411.57920030442854160.0
50.0251.704919262546719.14513747665447614.826936191579087
65.176267664515772.017867055658692274.8857908505193.597067360087236
713.77413598862674273.709948900601866.053601166976081192.13930687457574
879.3933495435741149.3254319545132239.58700808397952617.371203348713948
9165.3175012513938835.9460740487691443.8420755709120940.571342059705614

Sub Motif Members