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NonredundantMotifs:25

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant25
  • db :HOCOMOCO
  • Id :TGIF1_si
  • name :
  • score :0.2503789537870696
  • External refs:
EntrezGene:7050
UniProt:7050

  • Internal refs:
EntrezGene:7050


Motif matrix
P0ACGT
13.20806451612902734.19516129032256754.3048387096774034.304838709677403
20.00.00.016.0129032258064
30.01.096774193548383514.916129032258010.0
416.01290322580640.00.00.0
50.016.01290322580640.00.0
616.01290322580640.00.00.0
73.20806451612902732.2209677419354729.349999999999971.2338709677419308

Sub Motif Members