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NonredundantMotifs:30

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant30
  • db :HOCOMOCO
  • Id :ZN219_f1
  • name :
  • score :3.2574642583338225
  • External refs:
EntrezGene:51222
UniProt:51222

  • Internal refs:
EntrezGene:51222


Motif matrix
P0ACGT
13.8613861386138744.290429042904289513.2145214521452064.633663366336628
211.5841584158415960.81518151815181647.3795379537953846.221122112211214
30.77227722772277230.3861386138613873722.910891089108931.9306930693069317
40.02.316831683168316722.910891089108930.7722772277227723
50.00.3861386138613873720.594059405940595.019801980198018
60.4290429042904290.772277227722772324.026402640264050.7722772277227723
70.00.3861386138613873725.2277227722772470.38613861386138737
80.386138613861387370.025.6138613861386370.0
90.815181518151816411.2409240924092323.904290429042900410.039603960396036
101.15841584158415974.63366336633662819.4356435643564470.7722772277227723
110.01.158415841584159723.6831683168316861.1584158415841597
1214.8556105610560963.2285478547854741.64108910891089086.2747524752475154

Sub Motif Members