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NonredundantMotifs:32

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Representative Motif


Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon
May 2013, Collection Name: Non-redundant known motifs
Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.
207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name  :non-redundant32
  • db  :HOMER
  • Id  :POU5F1_mES-Oct4-ChIP-Seq
  • name  :
  • score  :0.16105743559422916
  • External refs:
EntrezGene:5460
UniProt:5460

  • Internal refs:
EntrezGene:5460


Motif matrix
POACGT
15793326326353
27776777
3729276492
41054775730
5727760577
654673077
76777777
872776757
945953208501033
1029517274282692

Sub Motif Members