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NonredundantMotifs:34

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant34
  • db :SWISSREGULON
  • Id :NFATC1..3.p2
  • name :NFATC1
  • score :0.1729565267707871
  • External refs:
EntrezGene:NFATC1
UniProt:NFATC1

  • Internal refs:
EntrezGene:NFATC1


Motif matrix
P0ACGT
173.01639793.510100999999920.99969364.699776
2146.5190617.54708755.54484932.614971
352.66695851.997261108.52985439.031894
4109.2407299.2059075.558978128.220353
52.7136850249.5122820
61.71420250.5117670
7251.30866800.9172990
8249.56809402.6578730
9249.6734310.845651.7068860
10157.18366350.19476410.82494734.022593
1172.11184644.74166923.799103111.573349
1234.46401571.73510829.634182116.392662

Sub Motif Members