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NonredundantMotifs:36

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant36
  • db :HOCOMOCO
  • Id :RARA_f1
  • name :
  • score :0.2788936316060929
  • External refs:
EntrezGene:5914
UniProt:5914

  • Internal refs:
EntrezGene:5914


Motif matrix
P0ACGT
111.0935012730700719.5567150873845722.6211067781556034.716253700384445
257.98757683899470.00.00.0
30.00.057.98757683899470.0
40.00.057.98757683899470.0
50.00.00.057.9875768389947
60.057.98757683899470.00.0
757.98757683899470.00.00.0

Sub Motif Members