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NonredundantMotifs:47

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Representative Motif


Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon
May 2013, Collection Name: Non-redundant known motifs
Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.
207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name  :non-redundant47
  • db  :HOMER
  • Id  :NANOG_mES-Nanog-ChIP-Seq
  • name  :
  • score  :0.03222940009290264
  • External refs:
EntrezGene:79923
UniProt:79923

  • Internal refs:
EntrezGene:79923


Motif matrix
POACGT
127191633316583
257619193879407
317651681081329
420484191237305
5622412975353
672076747
772468204286
84991787244759
939337801627441
10123432351539773

Sub Motif Members