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NonredundantMotifs:50

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant50
  • db :HOCOMOCO
  • Id :MEF2D_f1
  • name :
  • score :0.1104659323757388
  • External refs:
EntrezGene:4209
UniProt:4209

  • Internal refs:
EntrezGene:4209


Motif matrix
P0ACGT
11.5052631578947380.57894736842105236.48421052631578652.431578947368417
20.09.1473684210526311.04210526315789530.8105263157894738
30.00.00.011.0
49.9578947368421070.01.04210526315789530.0
50.01.04210526315789530.09.957894736842107
62.08421052631578570.00.08.915789473684214
71.04210526315789530.00.09.957894736842107
84.1684210526315830.00.06.831578947368428
91.04210526315789530.00.09.957894736842107
109.9578947368421070.01.04210526315789530.0
110.92631578947368450.07.0631578947368453.010526315789476
123.47368421052632134.2842105263157862.6631578947368450.5789473684210523

Sub Motif Members