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NonredundantMotifs:61

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Representative Motif


Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon
May 2013, Collection Name: Non-redundant known motifs
Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.
207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name  :non-redundant61
  • db  :HOCOMOCO
  • Id  :CTCF_f2
  • name  :
  • score  :2.27747693767069
  • External refs:
EntrezGene:10664
UniProt:10664

  • Internal refs:
EntrezGene:10664


Motif matrix
P0ACGT
1280.5564199254187890.0926431787442420.42170470519871270.2371713144134
2464.4796836864638464.47440468283971268.3183710759745664.0354796784958
3687.9014166643329231.049845961732161529.2975805851677413.05909591254647
4170.705198162565722433.9464715689414115.160130914649141.49613847763507
523.5311527076596332748.791852177486434.5843137212744754.40062051736051
61923.853073400493792.74285403930718537.7400196660248306.97199201797827
7115.807351984672341677.9044066589091024.69090207182642.90527840837429
8354.78114695503381303.7856977334266385.16201639799124817.5790780373256
92387.2992063806114177.09130221149164143.15107178185102153.76635874984012
108.12272021967308811.0723125662884442802.15889905783739.95400727997823
11967.079886076259416.4597155249559751866.286742269504711.481595253063388
12157.8770562578218107.686531295053271625.5519679962422970.1923835746661
1338.691363036934160.59479619359451762787.97727424508434.04450564816709
14118.1712063907407862.7868399333133952511.82509312037168.52479967936407
15296.4752445112322357.240617997612441.03911903974291166.5529575752058
161290.013475597660541.517121144159361475.33273157726954.44461080469106
17178.435605407019071445.86389955638581130.0211021453563106.98733201501787
18399.24425419286941002.3805140210958311.637792485936251148.0453784238705
191132.0681318726963693.1417630926046889.0964378375724147.00160632089722

Sub Motif Members