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NonredundantMotifs:65

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant65
  • db :HOCOMOCO
  • Id :ATF6A_si
  • name :
  • score :0.19333391617419116
  • External refs:
EntrezGene:22926
UniProt:22926

  • Internal refs:
EntrezGene:22926


Motif matrix
P0ACGT
13.69230769230769963.692307692307699611.69230769230770.923076923076922
20.04.30769230769236.461538461538469.23076923076924
30.05.2307692307692412.02.76923076923076
41.8461538461538468.09.230769230769240.923076923076922
50.00.6153846153846160.019.38461538461538
60.00.92307692307692219.076923076923080.0
718.461538461538460.9230769230769220.00.615384615384616
80.020.00.00.0
90.00.020.00.0
100.00.00.020.0
110.01.84615384615384618.153846153846160.0
121.8461538461538460.018.153846153846160.0

Sub Motif Members