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NonredundantMotifs:7

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Representative Motif


Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon
May 2013, Collection Name: Non-redundant known motifs
Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.
207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name  :non-redundant7
  • db  :HOCOMOCO
  • Id  :JUN_f1
  • name  :
  • score  :1.9588444942252214
  • External refs:
EntrezGene:3725
UniProt:3725

  • Internal refs:
EntrezGene:3725


Motif matrix
P0ACGT
1865.7865830826214574.7683450429025519.8758744008497265.1051986017543
258.649688282282858.3818031877934396.837098919716652011.6674107383349
369.5141029294654166.52036523237381940.1747779053112149.32675506097732
41975.19481612222128.0286619626636823.73313903848760498.57938400475724
5298.959935056939861.24330981231495221925.33275625887180.0
649.5360962880703619.87941347350390215.6161913553397012140.504300011215
770.654663650273952123.12702481215222.6720642370455649.082248428659014
82186.849825650036618.082476756987387.85367599997639212.750022721130764
9101.4030389703175816.5374985948242437.6963304793523869.899133083633

Sub Motif Members