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NonredundantMotifs:74

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant74
  • db :HOCOMOCO
  • Id :SRBP1_f2
  • name :
  • score :0.1107985686385359
  • External refs:
EntrezGene:6720
UniProt:6720

  • Internal refs:
EntrezGene:6720


Motif matrix
P0ACGT
1428.3770395165438462.08950007886995989.4966909330816289.74069761693215
2502.4408127799208461.552686950074361167.932251389525837.778177025907894
346.24003223664283120.6470581946612754.0113341359458451948.8055035781845
4143.26317770101758538.78262979051951374.385983189698113.2721374641934
5605.56928454885046.8468237054602771440.0520394603623117.23578043075779
6145.80191017633007591.32771676746231242.8380957308752189.73620547076186
784.1989510431087681.66788053862311397.54757246217266.289524101527463
8212.66741853627218176.74818563353213108.077845601584291672.2104783740415
96.85819716676502751.5137862028808162096.5332295159714.798715259816918
101719.646886997310760.749493158851976113.33530830152851275.972239687739
1173.0363254157739505.38904448986347932.9298766790175658.3486815607741

Sub Motif Members