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NonredundantMotifs:8

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant8
  • db :HOCOMOCO
  • Id :OTX2_si
  • name :
  • score :0.21470130889751804
  • External refs:
EntrezGene:5015
UniProt:5015

  • Internal refs:
EntrezGene:5015


Motif matrix
P0ACGT
13.60177865612648242.534584980237159610.9654150197628637.76383399209487
27.6837944664031875.0158102766798562.98814229249011339.177865612648244
35.8695652173913242.0276679841897287.89723320158104259.071146245059317
413.8735177865612927.0434782608695743.94861660079053370.0
510.7786561264822293.94861660079053372.98814229249011337.1501976284585265
66.9367588932806465.97628458498025159.9249011857707862.027667984189728
71.92094861660079593.948616600790533717.9288537549407541.06719367588933
82.98814229249011330.021.8774703557312620.0
923.798418972332081.067193675889330.00.0
100.00.00.024.8656126482214
110.96047430830039790.00.023.905138339921006
1224.86561264822140.00.00.0
1312.1660079051383582.134387351778668.6442687747035831.9209486166007959
1411.7391304347826243.94861660079053375.97628458498025153.201581027667993
154.1620553359683883.94861660079053378.5375494071146558.217391304347847

Sub Motif Members