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NonredundantMotifs:83

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant83
  • db :HOCOMOCO
  • Id :RARA_f2
  • name :
  • score :0.40599813945122243
  • External refs:
EntrezGene:5914
UniProt:5914

  • Internal refs:
EntrezGene:5914


Motif matrix
P0ACGT
167.78080402717981.970619033077742446.5945617765163364.654015163226166
20.00.41928064533569015119.071309031455571.50941032320849
35.9244267604443153.521957420819801777.6045407892458733.949075029489876
45.70221677656539150.83856129067138039.949520955666939104.50970097709619
50.754705161604242588.7783261966971121.966086734689829.500881907008763
6106.186823558438850.013.3037661183524011.50941032320849
727.4712328497984236.94275635348477526.01632025233459830.56969054438221
820.98495250830637846.1375721475473639.7351479351224614.142327409023792
933.5633718683769923.02685800924017248.2297562933256116.18001382905735
1053.6216878760444812.21363644047971638.7037350638945716.460940619581226
1129.78984606035585330.2636244314361152.22549208522578.72103742298236
1271.7848903993905915.92844544185593521.79837447655554411.48828968219791
138.77553514872700513.5553345055538293.834833263147444.834297082571521
1412.0752825856678716.59527579298141573.1559468677872829.173494753563425
1516.88022126491692313.21990998928526317.60556802319871473.2943007225991
1611.89917595647790184.2165615335937516.200977861324058.683284648604165
1787.7259055024575810.10466355259012913.8488309572888659.320599987663396

Sub Motif Members