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NonredundantMotifs:88

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant88
  • db :HOCOMOCO
  • Id :BRCA1_f1
  • name :
  • score :0.06605555365236132
  • External refs:
EntrezGene:672
UniProt:672

  • Internal refs:
EntrezGene:672


Motif matrix
P0ACGT
110.45292165140968914.31092073573505821.079522314200126.727048291098647
213.7503829349518810.019.99265307442474838.827376983066934
32.03426582996112039.0844599100302511.1187257399913750.33296151246075
44.068531659922232525.00858132453276334.969377898741568.523922109247003
52.034265829961120310.87398680260335532.72457949318357626.937580866695445
60.00.063.170154219018019.400258773425483
70.02.03426582996112030.070.53614716248237
80.00.00.072.5704129924435
94.5770981174125135.3139621320014560.136520455578152.5428322874513927

Sub Motif Members