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NonredundantMotifs:9

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant9
  • db :HOCOMOCO
  • Id :HXB6_f1
  • name :
  • score :0.1272361452579038
  • External refs:
EntrezGene:3216
UniProt:3216

  • Internal refs:
EntrezGene:3216


Motif matrix
P0ACGT
13.3165992682085270.63345108126350191.57189712757981.478052522948169
23.4722503713703050.8446014416846720.02.683148186945023
30.00.8446014416846720.06.155398558315335
40.8446014416846720.06.1553985583153350.0
57.00.00.00.0
60.00.00.07.0
70.00.00.07.0
80.8446014416846720.03.5277496286296952.62764892968564
96.1553985583153350.00.8446014416846720.0
100.00.00.07.0
110.00.06.1553985583153350.844601441684672
123.4722503713703053.5277496286296950.00.0
133.5277496286296951.7830474880009680.8446014416846720.844601441684672

Sub Motif Members