UBERON:0000060
From FANTOM5_SSTAR
Name: | anatomical wall | ||
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Namespace: | FANTOM | ||
Definition: | "Anatomical organ component enclosing an organ cavity." [FMA:82482] | ||
Xrefs: |
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Synonyms: |
"wall" EXACT [] "wall of organ" EXACT [FMA:82482] | ||
Comments: | merged FMA organ wall in to this class | ||
Alt_id: | UBERON:0009915 |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0000064(organ part) |
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Children
is a: | UBERON:0000328 (gut wall),UBERON:0000415 (artery wall),UBERON:0000459 (uterine wall),UBERON:0001256 (wall of urinary bladder),UBERON:0001811 (conjunctiva),UBERON:0003697 (abdominal wall),UBERON:0004663 (aorta wall),UBERON:0004894 (alveolar wall) |
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part of: | UBERON:0000042 (serous membrane),UBERON:0004923 (organ component layer) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10252-104B9 (Ileum epithelium, pool1)
- 10253-104C1 (Ileum epithelium, pool2)
- 10254-104C2
- 10255-104C3
- 10256-104C4
- 10257-104C5
- 10258-104C6
- 10259-104C7
- 10260-104C8 (Ileum epithelium, treated with RANKL, day03, pool3)
- 10418-106C4 (transitional-cell carcinoma cell line:5637)
... further results Mouse (Mus musculus)
- 10252-104B9 (Ileum epithelium, pool1)
- 10253-104C1 (Ileum epithelium, pool2)
- 10254-104C2
- 10255-104C3
- 10256-104C4
- 10257-104C5
- 10258-104C6
- 10259-104C7
- 10260-104C8 (Ileum epithelium, treated with RANKL, day03, pool3)
- 10418-106C4 (transitional-cell carcinoma cell line:5637)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000060 (anatomical wall), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
No analysis results