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UBERON:0000307

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Name:blastula
Namespace:FANTOM
Definition:"Organism at the blastula stage - an early stage of embryonic development in animals. It is produced by cleavage of a fertilized ovum and consists of a spherical layer of around 128 cells surrounding a central fluid-filled cavity called the blastocoel. The blastula follows the morula and precedes the gastrula in the developmental sequence." [Wikipedia:Blastula]
Xrefs:
links:

BILA:0000059
BTO:0000128
GAID:1294
[ 200px-Blastulation.png 200px-Blastulation.png]
MESH:A.16.254.270.274
OGEM:000006

OpenCyc:Mx4rEetFnKP2EdqAAAACs4vPlg
Synonyms: "blastosphere" RELATED [Wikipedia:Blastula]
"blastula embryo" EXACT [BILA:0000059]
Comments:TODO - check relationship with epiblast. Note in FMA this is not a subclass of embryo, but in uberon embryo is the whole organism from zygote onwards and thus includes the blastula
Alt_id: UBERON:0007011
UBERON:BTO_0000128-FMA_83041
Subset: inconsistent_with_fma

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data

Parents

is_a:UBERON:0000922(embryo)
develops_from:UBERON:0007010(cleaving embryo)



Children

develops from:UBERON:0004734 (gastrula)
part of:UBERON:0000358 (blastocyst),UBERON:0006595 (presumptive endoderm),UBERON:0006601 (presumptive ectoderm),UBERON:0006603 (presumptive mesoderm)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples
It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000307 (blastula), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr4:133574662..133574669,-#_be7f5f10d8c4dd3e3126e2d72180995ep2@Lin28a
1.58e-86FFCP PHASE1:Mm9::chr14:55557307..55557316,+#_be7f5f10d8c4dd3e3126e2d72180995ep11@Cmtm5
1.58e-86FFCP PHASE2:Mm9::chr6:122774653..122774665,+#_be7f5f10d8c4dd3e3126e2d72180995e+, p@chr6:122774653..122774665
1.58e-86FFCP PHASE1:Mm9::chr13:109236868..109236869,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr13:109236868..109236869, +
1.58e-86FFCP PHASE1:Mm9::chr8:44265871..44265878,+#_be7f5f10d8c4dd3e3126e2d72180995ep2@Triml2
1.58e-86FFCP PHASE2:Mm9::chrX:22692718..22692721,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chrX:22692718..22692721, +
1.58e-86FFCP PHASE1:Mm9::chrX:135868788..135868795,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chrX:135868788..135868795, +
1.58e-86FFCP PHASE2:Mm9::chr16:44262965..44262975,-#_be7f5f10d8c4dd3e3126e2d72180995ep@chr16:44262965..44262975, -
1.58e-86FFCP PHASE2:Mm9::chr2:10444938..10444948,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr2:10444938..10444948, +
1.58e-86FFCP PHASE1:Mm9::chrX:132804797..132804808,+#_be7f5f10d8c4dd3e3126e2d72180995ep4@Ngfrap1
1.58e-86FFCP PHASE2:Mm9::chr11:114739327..114739352,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr11:114739327..114739352, +
1.58e-86FFCP PHASE1:Mm9::chr4:133574662..133574669,-#_be7f5f10d8c4dd3e3126e2d72180995ep2@Lin28a
1.58e-86FFCP PHASE2:Mm9::chr1:174143295..174143309,-#_be7f5f10d8c4dd3e3126e2d72180995ep@chr1:174143295..174143309, -
1.58e-86FFCP PHASE1:Mm9::chr17:6988793..6988807,-#_be7f5f10d8c4dd3e3126e2d72180995ep@chr17:6988793..6988807, -
1.58e-86FFCP PHASE2:Mm9::chr14:55557319..55557330,+#_be7f5f10d8c4dd3e3126e2d72180995ep7@Cmtm5
1.58e-86FFCP PHASE1:Mm9::chr6:122774653..122774665,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr6:122774653..122774665, +
1.58e-86FFCP PHASE1:Mm9::chr11:78698925..78698930,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr11:78698925..78698930, +
1.58e-86FFCP PHASE1:Mm9::chrX:22692718..22692721,+#_be7f5f10d8c4dd3e3126e2d72180995e+, p@chrX:22692718..22692721
1.58e-86FFCP PHASE2:Mm9::chr6:12861081..12861085,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr6:12861081..12861085, +
1.58e-86FFCP PHASE1:Mm9::chr13:68409910..68409914,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr13:68409910..68409914, +
1.58e-86FFCP PHASE1:Mm9::chr11:114739327..114739352,+#_be7f5f10d8c4dd3e3126e2d72180995e+, p@chr11:114739327..114739352
1.58e-86FFCP PHASE2:Mm9::chr9:122510273..122510281,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr9:122510273..122510281, +
1.58e-86FFCP PHASE2:Mm9::chrX:135868692..135868701,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chrX:135868692..135868701, +
1.58e-86FFCP PHASE2:Mm9::chr14:55556656..55556665,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr14:55556656..55556665, +
1.58e-86FFCP PHASE2:Mm9::chr19:53750863..53750906,+#_be7f5f10d8c4dd3e3126e2d72180995e+, p@chr19:53750863..53750906
1.58e-86FFCP PHASE1:Mm9::chr14:55557459..55557474,+#_be7f5f10d8c4dd3e3126e2d72180995ep6@Cmtm5
1.58e-86FFCP PHASE1:Mm9::chr14:55556656..55556665,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr14:55556656..55556665, +
1.58e-86FFCP PHASE2:Mm9::chr8:44265871..44265878,+#_be7f5f10d8c4dd3e3126e2d72180995ep2@Triml2
1.58e-86FFCP PHASE1:Mm9::chr1:174143295..174143309,-#_be7f5f10d8c4dd3e3126e2d72180995ep@chr1:174143295..174143309, -
1.58e-86FFCP PHASE1:Mm9::chr8:44392310..44392319,-#_be7f5f10d8c4dd3e3126e2d72180995ep4@Zfp42
1.58e-86FFCP PHASE2:Mm9::chr4:9880126..9880128,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr4:9880126..9880128, +
1.58e-86FFCP PHASE1:Mm9::chr16:44262965..44262975,-#_be7f5f10d8c4dd3e3126e2d72180995ep@chr16:44262965..44262975, -
1.58e-86FFCP PHASE2:Mm9::chr9:59378043..59378047,-#_be7f5f10d8c4dd3e3126e2d72180995ep@chr9:59378043..59378047, -
1.58e-86FFCP PHASE1:Mm9::chr3:51025125..51025133,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr3:51025125..51025133, +
1.58e-86FFCP PHASE1:Mm9::chr14:55557319..55557330,+#_be7f5f10d8c4dd3e3126e2d72180995ep7@Cmtm5
1.58e-86FFCP PHASE1:Mm9::chr9:59378043..59378047,-#_be7f5f10d8c4dd3e3126e2d72180995ep@chr9:59378043..59378047, -
1.58e-86FFCP PHASE1:Mm9::chr4:9880126..9880128,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr4:9880126..9880128, +
1.58e-86FFCP PHASE2:Mm9::chr13:109236868..109236869,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr13:109236868..109236869, +
1.58e-86FFCP PHASE2:Mm9::chrX:135868788..135868795,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chrX:135868788..135868795, +
1.58e-86FFCP PHASE2:Mm9::chr14:55557268..55557274,+#_be7f5f10d8c4dd3e3126e2d72180995ep14@Cmtm5
1.58e-86FFCP PHASE2:Mm9::chr13:68409910..68409914,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr13:68409910..68409914, +
1.58e-86FFCP PHASE1:Mm9::chr14:55557268..55557274,+#_be7f5f10d8c4dd3e3126e2d72180995ep14@Cmtm5
1.58e-86FFCP PHASE1:Mm9::chr12:87810964..87810976,-#_be7f5f10d8c4dd3e3126e2d72180995ep@chr12:87810964..87810976, -
1.58e-86FFCP PHASE1:Mm9::chr16:66852878..66852880,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr16:66852878..66852880, +
1.58e-86FFCP PHASE2:Mm9::chr17:66833174..66833180,-#_be7f5f10d8c4dd3e3126e2d72180995ep@chr17:66833174..66833180, -
1.58e-86FFCP PHASE2:Mm9::chrX:132804797..132804808,+#_be7f5f10d8c4dd3e3126e2d72180995ep4@Ngfrap1
1.58e-86FFCP PHASE1:Mm9::chr17:66833174..66833180,-#_be7f5f10d8c4dd3e3126e2d72180995ep@chr17:66833174..66833180, -
1.58e-86FFCP PHASE1:Mm9::chr7:92689753..92689757,-#_be7f5f10d8c4dd3e3126e2d72180995ep@chr7:92689753..92689757, -
1.58e-86FFCP PHASE2:Mm9::chr16:66852878..66852880,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr16:66852878..66852880, +
1.58e-86FFCP PHASE1:Mm9::chrX:35180221..35180224,+#_be7f5f10d8c4dd3e3126e2d72180995ep1@Rhox6
1.58e-86FFCP PHASE2:Mm9::chr14:55557307..55557316,+#_be7f5f10d8c4dd3e3126e2d72180995ep11@Cmtm5
1.58e-86FFCP PHASE1:Mm9::chr6:12861081..12861085,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr6:12861081..12861085, +
1.58e-86FFCP PHASE2:Mm9::chr12:87810964..87810976,-#_be7f5f10d8c4dd3e3126e2d72180995ep@chr12:87810964..87810976, -
1.58e-86FFCP PHASE1:Mm9::chr8:28338006..28338016,-#_be7f5f10d8c4dd3e3126e2d72180995ep@chr8:28338006..28338016, -
1.58e-86FFCP PHASE1:Mm9::chrX:135868692..135868701,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chrX:135868692..135868701, +
1.58e-86FFCP PHASE1:Mm9::chr9:122510273..122510281,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr9:122510273..122510281, +
1.58e-86FFCP PHASE2:Mm9::chr14:55557459..55557474,+#_be7f5f10d8c4dd3e3126e2d72180995ep6@Cmtm5
1.58e-86FFCP PHASE1:Mm9::chr19:53750863..53750906,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr19:53750863..53750906, +
1.58e-86FFCP PHASE1:Mm9::chr2:10444938..10444948,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr2:10444938..10444948, +
1.58e-86FFCP PHASE2:Mm9::chr8:28338006..28338016,-#_be7f5f10d8c4dd3e3126e2d72180995ep@chr8:28338006..28338016, -
1.58e-86FFCP PHASE2:Mm9::chr3:51025125..51025133,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr3:51025125..51025133, +
1.58e-86FFCP PHASE2:Mm9::chr7:92689753..92689757,-#_be7f5f10d8c4dd3e3126e2d72180995ep@chr7:92689753..92689757, -
1.58e-86FFCP PHASE2:Mm9::chr8:44392310..44392319,-#_be7f5f10d8c4dd3e3126e2d72180995ep4@Zfp42
1.58e-86FFCP PHASE1:Mm9::chr9:114472387..114472401,-#_be7f5f10d8c4dd3e3126e2d72180995ep@chr9:114472387..114472401, -
1.58e-86FFCP PHASE2:Mm9::chr11:78698925..78698930,+#_be7f5f10d8c4dd3e3126e2d72180995ep@chr11:78698925..78698930, +
1.58e-86FFCP PHASE2:Mm9::chrX:35180221..35180224,+#_be7f5f10d8c4dd3e3126e2d72180995ep1@Rhox6
1.58e-86FFCP PHASE2:Mm9::chr17:6988793..6988807,-#_be7f5f10d8c4dd3e3126e2d72180995ep@chr17:6988793..6988807, -
1.58e-86FFCP PHASE2:Mm9::chr9:114472387..114472401,-#_be7f5f10d8c4dd3e3126e2d72180995ep@chr9:114472387..114472401, -
5.79e-79FFCP PHASE2:Hg19::chr7:135931480..135931486,+#_60a1e30aa229218b1e4231b3fe83c3dap@chr7:135931480..135931486, +
5.79e-79FFCP PHASE1:Hg19::chr10:120921270..120921282,-#_60a1e30aa229218b1e4231b3fe83c3dap@chr10:120921270..120921282, -
5.79e-79FFCP PHASE2:Hg19::chr10:120921270..120921282,-#_60a1e30aa229218b1e4231b3fe83c3dap@chr10:120921270..120921282, -
5.79e-79FFCP PHASE1:Hg19::chr7:135931480..135931486,+#_60a1e30aa229218b1e4231b3fe83c3dap@chr7:135931480..135931486, +
1.33e-65FFCP PHASE2:Mm9::chr13:120218522..120218537,+#_a28ebce25842097f7711d81fbb1ca8cfp@chr13:120218522..120218537, +
1.33e-65FFCP PHASE2:Mm9::chr16:53576572..53576579,+#_a28ebce25842097f7711d81fbb1ca8cfp@chr16:53576572..53576579, +
1.33e-65FFCP PHASE2:Mm9::chr2:155572913..155572925,+#_a28ebce25842097f7711d81fbb1ca8cf+, p@chr2:155572913..155572925
1.33e-65FFCP PHASE1:Mm9::chr2:155572913..155572925,+#_a28ebce25842097f7711d81fbb1ca8cfp@chr2:155572913..155572925, +
1.33e-65FFCP PHASE2:Mm9::chr8:44392345..44392363,-#_a28ebce25842097f7711d81fbb1ca8cfp1@Zfp42
1.33e-65FFCP PHASE1:Mm9::chr1:174143273..174143293,-#_a28ebce25842097f7711d81fbb1ca8cfp@chr1:174143273..174143293, -
1.33e-65FFCP PHASE2:Mm9::chr8:44392404..44392412,-#_a28ebce25842097f7711d81fbb1ca8cfp3@Zfp42
1.33e-65FFCP PHASE2:Mm9::chr2:172371713..172371724,+#_a28ebce25842097f7711d81fbb1ca8cfp@chr2:172371713..172371724, +
1.33e-65FFCP PHASE1:Mm9::chr2:172371713..172371724,+#_a28ebce25842097f7711d81fbb1ca8cfp@chr2:172371713..172371724, +
1.33e-65FFCP PHASE1:Mm9::chr5:66542571..66542582,-#_a28ebce25842097f7711d81fbb1ca8cfp13@Rbm47
1.33e-65FFCP PHASE2:Mm9::chr14:55557416..55557422,+#_a28ebce25842097f7711d81fbb1ca8cfp13@Cmtm5
1.33e-65FFCP PHASE1:Mm9::chr9:118387933..118387942,+#_a28ebce25842097f7711d81fbb1ca8cfp4@Eomes
1.33e-65FFCP PHASE1:Mm9::chr8:109128151..109128162,+#_a28ebce25842097f7711d81fbb1ca8cfp5@Cdh1
1.33e-65FFCP PHASE2:Mm9::chr5:30062362..30062371,+#_a28ebce25842097f7711d81fbb1ca8cfp6@Dnajb6
1.33e-65FFCP PHASE1:Mm9::chr13:120218522..120218537,+#_a28ebce25842097f7711d81fbb1ca8cfp@chr13:120218522..120218537, +
1.33e-65FFCP PHASE2:Mm9::chr5:66542571..66542582,-#_a28ebce25842097f7711d81fbb1ca8cfp13@Rbm47
1.33e-65FFCP PHASE2:Mm9::chr9:118387933..118387942,+#_a28ebce25842097f7711d81fbb1ca8cfp4@Eomes
1.33e-65FFCP PHASE1:Mm9::chr16:53576572..53576579,+#_a28ebce25842097f7711d81fbb1ca8cfp@chr16:53576572..53576579, +
1.33e-65FFCP PHASE1:Mm9::chr14:55557416..55557422,+#_a28ebce25842097f7711d81fbb1ca8cfp13@Cmtm5
1.33e-65FFCP PHASE1:Mm9::chr8:44392404..44392412,-#_a28ebce25842097f7711d81fbb1ca8cfp3@Zfp42
1.33e-65FFCP PHASE1:Mm9::chr9:114472360..114472371,-#_a28ebce25842097f7711d81fbb1ca8cfp@chr9:114472360..114472371, -
1.33e-65FFCP PHASE2:Mm9::chr8:109128151..109128162,+#_a28ebce25842097f7711d81fbb1ca8cfp5@Cdh1
1.33e-65FFCP PHASE2:Mm9::chr9:114472360..114472371,-#_a28ebce25842097f7711d81fbb1ca8cfp@chr9:114472360..114472371, -
1.33e-65FFCP PHASE1:Mm9::chr5:30062362..30062371,+#_a28ebce25842097f7711d81fbb1ca8cfp6@Dnajb6
1.33e-65FFCP PHASE1:Mm9::chr8:44392345..44392363,-#_a28ebce25842097f7711d81fbb1ca8cfp1@Zfp42
1.33e-65FFCP PHASE2:Mm9::chr1:174143273..174143293,-#_a28ebce25842097f7711d81fbb1ca8cfp@chr1:174143273..174143293, -
2.21e-65FFCP PHASE2:Mm9::chr5:109984555..109984566,-#_6dfbebcf88351db863a94dfd13367d3bp@chr5:109984555..109984566, -
2.21e-65FFCP PHASE2:Mm9::chr12:13000114..13000147,+#_6dfbebcf88351db863a94dfd13367d3bp@chr12:13000114..13000147, +

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