UBERON:0000463
From FANTOM5_SSTAR
Name: | organism substance | |
---|---|---|
Namespace: | FANTOM | |
Definition: | "Material anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body." [CARO:MAH] | |
Xrefs: |
| |
Synonyms: |
"body fluid or substance" EXACT [MA:0002450] "body substance" EXACT [FMA:9669] "organism substance" EXACT [] "portion of body substance" EXACT [FMA:9669] | |
Alt_id: | UBERON:CARO_0000004-FBbt_00007019 | |
Subset: | upper_level |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000465(material anatomical entity) |
---|---|
part_of: | UBERON:0000468(multi-cellular organism) |
Children
is a: | UBERON:0006312 (ocular refractive media),UBERON:0006314 (bodily fluid) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10053-101G8 (blood, adult, pool1)
- 10266-104D5
- 10268-104D7 (eye - vitreous humor, donor1)
- 10294-104G6 (cerebrospinal fluid, donor2)
- 10296-104G8
- 10322-105A7
- 10324-105A9
- 10449-106F8 (cord blood derived cell line:COBL-a untreated)
- 10452-106G2 (cord blood derived cell line:COBL-a 24h infection(-C))
- 10453-106G3 (cord blood derived cell line:COBL-a 24h infection)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000463 (organism substance), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data