Personal tools

UBERON:0000487

From FANTOM5_SSTAR

Jump to: navigation, search

Name:simple squamous epithelium
Namespace:FANTOM
Definition:"Unilaminar epithelium which consists of a single layer of squamous cells. Examples: pulmonary alveolar epithelium, endothelium.[FMA]" [CARO:MAH, FMA:45565, Wikipedia:Simple_squamous_epithelium]
Xrefs:
links:

AAO:0010066
AEO:0000070
BILA:0000070
BTO:0002073
CARO:0000070
EHDAA2:0003070
FMA:45565
HAO:0000070
[1]
ncithesaurus:Simple_Squamous_Epithelium
TAO:0001498
XAO:0004010

ZFA:0001498
Synonyms: "epithelium simplex squamosum" EXACT []
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:CARO_0000070-FMA_45565-ZFA_0001498
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000490(unilaminar epithelium),UBERON:0006914(squamous epithelium)



Children

is a:UBERON:0001136 (mesothelium),UBERON:0001986 (endothelium),UBERON:0004821 (pulmonary alveolus epithelium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000487 (simple squamous epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
3.71e-122FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_7c0e4b153533210bd4d0d7ddbb88c4a2p@chr18:33046982..33046991, -
3.71e-122FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_7c0e4b153533210bd4d0d7ddbb88c4a2p@chr18:33046982..33046991, -
8.56e-103FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_5d2c404de55dc76935147fbbea2327e9p1@MIR216A
8.56e-103FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_5d2c404de55dc76935147fbbea2327e9p1@MIR216A
5.84e-99FFCP PHASE2:Hg19::chr6:78171774..78171792,+#_c7b596e1f4d9aa617b09f805a823e90dp@chr6:78171774..78171792, +
5.84e-99FFCP PHASE1:Hg19::chr6:78171774..78171792,+#_c7b596e1f4d9aa617b09f805a823e90dp@chr6:78171774..78171792, +
1.04e-98FFCP PHASE2:Hg19::chr18:33047157..33047168,-#_a14d659c50a33e712fccae90e464463ep@chr18:33047157..33047168, -
1.04e-98FFCP PHASE1:Hg19::chr18:33047157..33047168,-#_a14d659c50a33e712fccae90e464463ep@chr18:33047157..33047168, -
1.25e-97FFCP PHASE1:Hg19::chr7:139741849..139741879,-#_db903a140cc27153a80fb20293737347p12@PARP12
1.25e-97FFCP PHASE2:Hg19::chr7:139741849..139741879,-#_db903a140cc27153a80fb20293737347p12@PARP12
1.84e-95FFCP PHASE2:Hg19::chr7:139741594..139741615,-#_cb487c4f47c605dd3cb94f109c0ff8b9p5@PARP12
1.84e-95FFCP PHASE1:Hg19::chr7:139741594..139741615,-#_cb487c4f47c605dd3cb94f109c0ff8b9p5@PARP12
5.23e-95FFCP PHASE1:Hg19::chr12:118112251..118112272,-#_bcddc060717dda3c68b4cd557dec2c78p12@KSR2
5.23e-95FFCP PHASE2:Hg19::chr12:118112251..118112272,-#_bcddc060717dda3c68b4cd557dec2c78p12@KSR2
1.59e-94FFCP PHASE1:Hg19::chr3:43538305..43538325,-#_eee6bdfcf7dd7ca7a220f98e90b42a3dp@chr3:43538305..43538325, -
1.59e-94FFCP PHASE2:Hg19::chr3:43538305..43538325,-#_eee6bdfcf7dd7ca7a220f98e90b42a3dp@chr3:43538305..43538325, -
9.39e-92FFCP PHASE1:Hg19::chrX:71299684..71299699,+#_cb6c00d2bc8b290a9bbf4eb304eafa6dp@chrX:71299684..71299699, +
9.39e-92FFCP PHASE2:Hg19::chrX:71299684..71299699,+#_cb6c00d2bc8b290a9bbf4eb304eafa6dp@chrX:71299684..71299699, +
1.89e-88FFCP PHASE2:Hg19::chr10:50153703..50153720,+#_d97f09d851770403efc812f28cd5c4e1p7@WDFY4
1.89e-88FFCP PHASE1:Hg19::chr10:50153703..50153720,+#_d97f09d851770403efc812f28cd5c4e1p7@WDFY4
2.49e-87FFCP PHASE2:Hg19::chr10:50153735..50153750,+#_c5bfd13ea754c73fff99ede315534574p6@WDFY4
2.49e-87FFCP PHASE1:Hg19::chr10:50153735..50153750,+#_c5bfd13ea754c73fff99ede315534574p6@WDFY4
2.7e-86FFCP PHASE1:Hg19::chrX:15518894..15518905,+#_8fab8cd7da0f1ba47e6d09277453dbe5p2@BMX
2.7e-86FFCP PHASE2:Hg19::chrX:15518894..15518905,+#_8fab8cd7da0f1ba47e6d09277453dbe5p2@BMX
1.16e-85FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_44d322b2eab5012bffa1aa23f65d6cc3p@chr6:3753188..3753192, -
1.16e-85FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_44d322b2eab5012bffa1aa23f65d6cc3p@chr6:3753188..3753192, -
8.49e-84FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_1c9cde7cb0dfd553e4f9063e55fffa04p1@ENST00000513158
8.49e-84FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_1c9cde7cb0dfd553e4f9063e55fffa04p1@ENST00000513158
1.29e-83FFCP PHASE1:Hg19::chr10:99655692..99655725,-#_15cd29885e29b120130997644a867cc6p@chr10:99655692..99655725, -
1.29e-83FFCP PHASE2:Hg19::chr10:99655692..99655725,-#_15cd29885e29b120130997644a867cc6p@chr10:99655692..99655725, -
1.82e-83FFCP PHASE2:Hg19::chr7:150329732..150329739,-#_8a29eea593b75c8be5b538d2bfab57c4p8@GIMAP6
1.82e-83FFCP PHASE1:Hg19::chr7:150329732..150329739,-#_8a29eea593b75c8be5b538d2bfab57c4p8@GIMAP6
3.1e-83FFCP PHASE2:Hg19::chr14:75469820..75469826,+#_08ff02330ea7111e464bc8138a154552p4@EIF2B2
3.1e-83FFCP PHASE1:Hg19::chr14:75469820..75469826,+#_08ff02330ea7111e464bc8138a154552p4@EIF2B2
8.46e-83FFCP PHASE2:Hg19::chr6:78171746..78171769,+#_28eb17cf5926a85086c882d0d0618c29p@chr6:78171746..78171769, +
8.46e-83FFCP PHASE1:Hg19::chr6:78171746..78171769,+#_28eb17cf5926a85086c882d0d0618c29p@chr6:78171746..78171769, +
1.64e-82FFCP PHASE1:Hg19::chr6:148664333..148664338,-#_3e54cf02151bf76a56b8363bfc94c939p@chr6:148664333..148664338, -
1.64e-82FFCP PHASE2:Hg19::chr6:148664333..148664338,-#_3e54cf02151bf76a56b8363bfc94c939p@chr6:148664333..148664338, -
1.09e-80FFCP PHASE2:Hg19::chr14:38725228..38725236,-#_f8ac4469e43ddf6c7ad2b3509539e4a7p5@CLEC14A
1.09e-80FFCP PHASE1:Hg19::chr14:38725228..38725236,-#_f8ac4469e43ddf6c7ad2b3509539e4a7p5@CLEC14A
2.12e-80FFCP PHASE2:Hg19::chr5:34656634..34656645,+#_1790a0b01bbe31d544f76eadd77bbe04p15@RAI14
2.12e-80FFCP PHASE1:Hg19::chr5:34656634..34656645,+#_1790a0b01bbe31d544f76eadd77bbe04p15@RAI14
1.14e-79FFCP PHASE2:Hg19::chr4:145566874..145566889,+#_ee01f605c355881ea47ce136f33a7f61p15@HHIP
1.14e-79FFCP PHASE1:Hg19::chr4:145566874..145566889,+#_ee01f605c355881ea47ce136f33a7f61p15@HHIP
1.31e-79FFCP PHASE1:Hg19::chr9:139563124..139563129,+#_24e46c1e94051691cf1af88bc13adc69p@chr9:139563124..139563129, +
1.31e-79FFCP PHASE2:Hg19::chr9:139563124..139563129,+#_24e46c1e94051691cf1af88bc13adc69p@chr9:139563124..139563129, +
1.36e-79FFCP PHASE1:Hg19::chr17:62084108..62084111,-#_d4ea44077a51b2bb95674f1c0de2a35cp5@ICAM2
1.36e-79FFCP PHASE2:Hg19::chr17:62084108..62084111,-#_d4ea44077a51b2bb95674f1c0de2a35cp5@ICAM2
5.67e-79FFCP PHASE1:Hg19::chr7:150690812..150690817,+#_50dda7dc4e040309391014dd217cce4ep10@NOS3
5.67e-79FFCP PHASE2:Hg19::chr7:150690812..150690817,+#_50dda7dc4e040309391014dd217cce4ep10@NOS3
1.22e-78FFCP PHASE1:Hg19::chr5:176433333..176433349,-#_02a7bcab3b9d4d5209f329b759424b4fp11@UIMC1
1.22e-78FFCP PHASE2:Hg19::chr5:176433333..176433349,-#_02a7bcab3b9d4d5209f329b759424b4fp11@UIMC1
3.05e-77FFCP PHASE1:Hg19::chr11:124761247..124761258,-#_08ddfcd2f2b95ab8ee09372f0c976cbep@chr11:124761247..124761258, -
3.05e-77FFCP PHASE2:Hg19::chr11:124761247..124761258,-#_08ddfcd2f2b95ab8ee09372f0c976cbep@chr11:124761247..124761258, -
3.28e-77FFCP PHASE2:Hg19::chr14:38725249..38725254,-#_157cdb57666a89326f7f0dd530dc5f15p6@CLEC14A
3.28e-77FFCP PHASE1:Hg19::chr14:38725249..38725254,-#_157cdb57666a89326f7f0dd530dc5f15p6@CLEC14A
3.56e-77FFCP PHASE2:Hg19::chr1:22264210..22264241,+#_ab94f6a636c67d1abaf60140c143216cp@chr1:22264210..22264241, +
3.56e-77FFCP PHASE1:Hg19::chr1:22264210..22264241,+#_ab94f6a636c67d1abaf60140c143216cp@chr1:22264210..22264241, +
1.5e-75FFCP PHASE2:Hg19::chr9:139543445..139543462,+#_9128081f767c2ad456b518bf002aa88fp@chr9:139543445..139543462, +
1.5e-75FFCP PHASE1:Hg19::chr9:139543445..139543462,+#_9128081f767c2ad456b518bf002aa88fp@chr9:139543445..139543462, +
8.15e-75FFCP PHASE1:Hg19::chr9:139541134..139541139,+#_7e4a2278cff53a155fe91d90c06292e8p@chr9:139541134..139541139, +
8.15e-75FFCP PHASE2:Hg19::chr9:139541134..139541139,+#_7e4a2278cff53a155fe91d90c06292e8p@chr9:139541134..139541139, +
8.3e-75FFCP PHASE2:Hg19::chr12:105863705..105863718,+#_45acc26402edd60a660c2fa6da668fc6p@chr12:105863705..105863718, +
8.3e-75FFCP PHASE1:Hg19::chr12:105863705..105863718,+#_45acc26402edd60a660c2fa6da668fc6p@chr12:105863705..105863718, +
1.13e-74FFCP PHASE2:Hg19::chr13:32835894..32835907,+#_fa889ec0df4c1aee8864ade7a067ba88p@chr13:32835894..32835907, +
1.13e-74FFCP PHASE1:Hg19::chr13:32835894..32835907,+#_fa889ec0df4c1aee8864ade7a067ba88p@chr13:32835894..32835907, +
4.14e-74FFCP PHASE2:Hg19::chr19:41985048..41985050,-#_b371befad27d026f04c81949094b6e57p@chr19:41985048..41985050, -
4.14e-74FFCP PHASE1:Hg19::chr19:41985048..41985050,-#_b371befad27d026f04c81949094b6e57p@chr19:41985048..41985050, -
1.41e-73FFCP PHASE1:Hg19::chr12:105863636..105863650,+#_5c479b3586b19bea014f419f3ffccb96p@chr12:105863636..105863650, +
1.41e-73FFCP PHASE2:Hg19::chr12:105863636..105863650,+#_5c479b3586b19bea014f419f3ffccb96p@chr12:105863636..105863650, +
4.24e-73FFCP PHASE1:Hg19::chr9:139543390..139543404,+#_623804bfc68a39d4c242a966c4da7703p@chr9:139543390..139543404, +
4.24e-73FFCP PHASE2:Hg19::chr9:139543390..139543404,+#_623804bfc68a39d4c242a966c4da7703p@chr9:139543390..139543404, +
6.36e-73FFCP PHASE1:Hg19::chr16:2220383..2220402,+#_8bd3c3d1210713e3275e95fd5526fec1p@chr16:2220383..2220402, +
6.36e-73FFCP PHASE2:Hg19::chr16:2220383..2220402,+#_8bd3c3d1210713e3275e95fd5526fec1p@chr16:2220383..2220402, +
3.75e-72FFCP PHASE2:Hg19::chr6:11607864..11607875,+#_2077d5afc03ebd4e8e8252e0e750941ap@chr6:11607864..11607875, +
3.75e-72FFCP PHASE1:Hg19::chr6:11607864..11607875,+#_2077d5afc03ebd4e8e8252e0e750941ap@chr6:11607864..11607875, +
6.16e-72FFCP PHASE2:Hg19::chr10:129785574..129785580,+#_8090572f9dfbe997c7608e941cc20f45p14@PTPRE
6.16e-72FFCP PHASE1:Hg19::chr10:129785574..129785580,+#_8090572f9dfbe997c7608e941cc20f45p14@PTPRE
1.58e-71FFCP PHASE1:Hg19::chr13:32835912..32835936,+#_3fe54d653463b278d3ccf28a3c7739eap@chr13:32835912..32835936, +
1.58e-71FFCP PHASE2:Hg19::chr13:32835912..32835936,+#_3fe54d653463b278d3ccf28a3c7739eap@chr13:32835912..32835936, +
2.22e-71FFCP PHASE1:Hg19::chr12:96830523..96830532,+#_d120e3e300081e89b74d38bf6ba4a44bp@chr12:96830523..96830532, +
2.22e-71FFCP PHASE2:Hg19::chr12:96830523..96830532,+#_d120e3e300081e89b74d38bf6ba4a44bp@chr12:96830523..96830532, +
2.91e-71FFCP PHASE2:Hg19::chr1:16076122..16076138,-#_de8e88a5573e9714869431923f55efbep1@ENST00000418525
2.91e-71FFCP PHASE1:Hg19::chr1:16076122..16076138,-#_de8e88a5573e9714869431923f55efbep1@ENST00000418525
5.12e-71FFCP PHASE1:Hg19::chr12:12491541..12491552,-#_51cfc5e73c91a525474139cd00710e81p11@MANSC1
5.12e-71FFCP PHASE2:Hg19::chr12:12491541..12491552,-#_51cfc5e73c91a525474139cd00710e81p11@MANSC1
6.44e-69FFCP PHASE1:Hg19::chr18:33047117..33047138,-#_ca634778dfd888c5f422f2ae8c9256f3p@chr18:33047117..33047138, -
6.44e-69FFCP PHASE2:Hg19::chr18:33047117..33047138,-#_ca634778dfd888c5f422f2ae8c9256f3p@chr18:33047117..33047138, -
7.55e-69FFCP PHASE1:Hg19::chr18:33047076..33047099,-#_df4450efbd4f080c1c09e17b2a4012b9p@chr18:33047076..33047099, -
7.55e-69FFCP PHASE2:Hg19::chr18:33047076..33047099,-#_df4450efbd4f080c1c09e17b2a4012b9p@chr18:33047076..33047099, -
9.31e-69FFCP PHASE1:Hg19::chr1:28785607..28785624,+#_525e7b04691dd33d2e3c6f5ec31b6696p@chr1:28785607..28785624, +
9.31e-69FFCP PHASE2:Hg19::chr1:28785607..28785624,+#_525e7b04691dd33d2e3c6f5ec31b6696p@chr1:28785607..28785624, +
1.6e-68FFCP PHASE2:Hg19::chr3:58034268..58034295,+#_29f76c47e27be1bbc5b71c6129d9f03cp@chr3:58034268..58034295, +
1.6e-68FFCP PHASE1:Hg19::chr3:58034268..58034295,+#_29f76c47e27be1bbc5b71c6129d9f03cp@chr3:58034268..58034295, +
3.98e-68FFCP PHASE1:Hg19::chr15:39423060..39423066,+#_ea1d199ff815a12a758e609c40741d3dp@chr15:39423060..39423066, +
3.98e-68FFCP PHASE2:Hg19::chr15:39423060..39423066,+#_ea1d199ff815a12a758e609c40741d3dp@chr15:39423060..39423066, +
1.56e-65FFCP PHASE1:Hg19::chr2:225266779..225266786,-#_1421ee5923f34b64618bf04587e428b4p4@FAM124B
1.56e-65FFCP PHASE2:Hg19::chr2:225266779..225266786,-#_1421ee5923f34b64618bf04587e428b4p4@FAM124B
7.31e-65FFCP PHASE1:Hg19::chr17:47287786..47287797,+#_3bc9c21e1d2e77f3613eb863336ee5e1p4@ABI3
7.31e-65FFCP PHASE2:Hg19::chr17:47287786..47287797,+#_3bc9c21e1d2e77f3613eb863336ee5e1p4@ABI3










Property "Property value" (as page type) with input value "UBPROP:0000001 "Unilaminar epithelium that consists of a single layer of squamous cells.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Unilaminar epithelium that consists of a single layer of squamous cells.[CARO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Unilaminar epithelium that consists of a single layer of squamous cells.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.