UBERON:0000982
From FANTOM5_SSTAR
Name: | skeletal joint | ||
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Namespace: | FANTOM | ||
Definition: | "Anatomical cluster that consists of two or more adjacent skeletal structures, which may be interconnected by various types of tissue[VSAO]." [VSAO:0000101, Wikipedia:Joint] | ||
Xrefs: |
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Synonyms: |
"articular joint" RELATED [BTO:0001686] "articulation" BROAD [VSAO:0000101] "joint" BROAD [FMA:7490, VSAO:0000101] | ||
Alt_id: | UBERON:FBbt_00004645-FMA_228659-FMA_7490-MA_0000319-MIAA_0000188-XAO_0000171-ZFA_0001596 | ||
Subset: |
organ_slim uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0004905(articulation) |
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disjoint_from: | UBERON:0001474(bone element) |
union_of: | UBERON:0002217(synovial joint),UBERON:0011134(nonsynovial joint) |
part_of: | UBERON:0004770(articular system) |
Children
is a: | UBERON:0002217 (synovial joint),UBERON:0003657 (limb joint),UBERON:0011134 (nonsynovial joint) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10267-104D6
- 10295-104G7 (cruciate ligament, donor2)
- 10323-105A8
- 10441-106E9 (synovial sarcoma cell line:HS-SY-II)
- 11248-116E6 (Anulus Pulposus Cell, donor1)
- 11252-116F1 (Nucleus Pulposus Cell, donor1)
- 11291-117A4 (Synoviocyte, donor1)
- 11368-117I9 (Synoviocyte, donor2)
- 11409-118E5 (Nucleus Pulposus Cell, donor2)
- 11440-118H9 (Synoviocyte, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000982 (skeletal joint), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical cluster that consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[VSAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.