Personal tools

UBERON:0000998

From FANTOM5_SSTAR

Jump to: navigation, search

Name:seminal vesicle
Namespace:FANTOM
Definition:"Either of a pair of glandular pouches that lie one on either side of the male reproductive tract and in the human male secrete a sugar- and protein-containing fluid into the ejaculatory duct." [BTO:0001234, Wikipedia:Seminal_vesicle]
Xrefs:
links:

AAO:0010788
BTO:0001234
EFO:0000986
EMAPA:19180
EV:0100106
FMA:19386
GAID:394
[1]
[ 200px-Male_anatomy_en.svg.png 200px-Male_anatomy_en.svg.png]
MA:0000410
MAT:0000171
MESH:A.05.360.444.713
MIAA:0000171
ncithesaurus:Seminal_Vesicle
OpenCyc:Mx4rwTtRpJwpEbGdrcN5Y29ycA
SCTID:181434004

VHOG:0001379
Synonyms: "glandula seminalis" RELATED [BTO:0001234]
"glandula vesiculosa" RELATED [BTO:0001234]
"gon_male_sves" RELATED []
"seminal gland" BROAD []
"vas efferens" RELATED []
"vesicul%c3%a6 seminales" RELATED [Wikipedia:Seminal_vesicle]
"vesicula seminalis" RELATED [BTO:0001234]
"vesicula seminalis" RELATED [Wikipedia:Seminal_vesicle]
"vesiculae seminales" RELATED [Wikipedia:Seminal_vesicle]
"vesicular gland" RELATED [Wikipedia:Seminal_vesicle]
"vesicular glands" RELATED [Wikipedia:Seminal_vesicle]
"vesicular seminalis" RELATED [Wikipedia:Seminal_vesicle]
"vesicul�πエ�ヲ seminales" RELATED LATIN [Wikipedia:Seminal_vesicle]
Comments:Function notes: The seminal vesicles secrete a significant proportion of the fluid that ultimately becomes semen. Lipofuscin granules from dead epithelial cells give the secretion its yellowish color. About 50-70%[2] of the seminal fluid in humans originates from the seminal vesicles, but is not expelled in the first ejaculate fractions which are dominated by spermatozoa and zinc-rich prostatic fluid.
Alt_id: UBERON:FBbt_00004958-FMA_19386-MA_0000410-MIAA_0000171-WBbt_0006870
Subset: organ_slim
uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0006868(seminal fluid secreting gland)
develops_from:UBERON:0000080(mesonephros)
part_of:UBERON:0000473(testis)



Children

derives from:FF:0010201 (human seminal vesicle - adult sample)
part of:FF:0011380 (mouse vesicular gland- adult sample),FF:51-27F8 (vesicular gland, adult)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000998 (seminal vesicle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr11:34661390..34661395,-#_837a4bbb8fb52e05191ba3762dafdec8p@chr11:34661390..34661395, -
5.42e-195FFCP PHASE1:Hg19::chr11:34661390..34661395,-#_837a4bbb8fb52e05191ba3762dafdec8p@chr11:34661390..34661395, -
5.42e-195FFCP PHASE2:Hg19::chr11:60451339..60451345,-#_837a4bbb8fb52e05191ba3762dafdec8p@chr11:60451339..60451345, -
5.42e-195FFCP PHASE1:Hg19::chr11:60451339..60451345,-#_837a4bbb8fb52e05191ba3762dafdec8p@chr11:60451339..60451345, -
9.37e-99FFCP PHASE2:Hg19::chr20:43851184..43851194,+#_453a393677589f9941730e119b6ff499p@chr20:43851184..43851194, +
9.37e-99FFCP PHASE1:Hg19::chr20:43851353..43851363,+#_453a393677589f9941730e119b6ff499p@chr20:43851353..43851363, +
9.37e-99FFCP PHASE2:Hg19::chr20:43838296..43838299,+#_453a393677589f9941730e119b6ff499p@chr20:43838296..43838299, +
9.37e-99FFCP PHASE2:Hg19::chr20:43850865..43850873,+#_453a393677589f9941730e119b6ff499p@chr20:43850865..43850873, +
9.37e-99FFCP PHASE1:Hg19::chr20:43837283..43837290,+#_453a393677589f9941730e119b6ff499p@chr20:43837283..43837290, +
9.37e-99FFCP PHASE1:Hg19::chr19:15733072..15733082,+#_453a393677589f9941730e119b6ff499p@chr19:15733072..15733082, +
9.37e-99FFCP PHASE2:Hg19::chr20:43852924..43852944,+#_453a393677589f9941730e119b6ff499p@chr20:43852924..43852944, +
9.37e-99FFCP PHASE1:Hg19::chr20:43850995..43851023,+#_453a393677589f9941730e119b6ff499p@chr20:43850995..43851023, +
9.37e-99FFCP PHASE2:Hg19::chr20:43837196..43837202,+#_453a393677589f9941730e119b6ff499p@chr20:43837196..43837202, +
9.37e-99FFCP PHASE2:Hg19::chr20:43836066..43836075,-#_453a393677589f9941730e119b6ff499p@chr20:43836066..43836075, -
9.37e-99FFCP PHASE1:Hg19::chr19:15729846..15729851,+#_453a393677589f9941730e119b6ff499p@chr19:15729846..15729851, +
9.37e-99FFCP PHASE2:Hg19::chr20:43851747..43851752,+#_453a393677589f9941730e119b6ff499p@chr20:43851747..43851752, +
9.37e-99FFCP PHASE1:Hg19::chr20:43850664..43850675,+#_453a393677589f9941730e119b6ff499p@chr20:43850664..43850675, +
9.37e-99FFCP PHASE2:Hg19::chr20:43836755..43836769,+#_453a393677589f9941730e119b6ff499p@chr20:43836755..43836769, +
9.37e-99FFCP PHASE2:Hg19::chr3:46485058..46485065,-#_453a393677589f9941730e119b6ff499p1@AK126237
9.37e-99FFCP PHASE1:Hg19::chr20:43851878..43851883,+#_453a393677589f9941730e119b6ff499p@chr20:43851878..43851883, +
9.37e-99FFCP PHASE2:Hg19::chr20:43850628..43850633,+#_453a393677589f9941730e119b6ff499p@chr20:43850628..43850633, +
9.37e-99FFCP PHASE2:Hg19::chr11:1030990..1030995,-#_453a393677589f9941730e119b6ff499p@chr11:1030990..1030995, -
9.37e-99FFCP PHASE2:Hg19::chr20:43851422..43851430,+#_453a393677589f9941730e119b6ff499p@chr20:43851422..43851430, +
9.37e-99FFCP PHASE1:Hg19::chr20:43850436..43850444,-#_453a393677589f9941730e119b6ff499p@chr20:43850436..43850444, -
9.37e-99FFCP PHASE1:Hg19::chr20:43851492..43851518,+#_453a393677589f9941730e119b6ff499p@chr20:43851492..43851518, +
9.37e-99FFCP PHASE2:Hg19::chr20:43850370..43850384,+#_453a393677589f9941730e119b6ff499p@chr20:43850370..43850384, +
9.37e-99FFCP PHASE2:Hg19::chr20:43851095..43851098,+#_453a393677589f9941730e119b6ff499p@chr20:43851095..43851098, +
9.37e-99FFCP PHASE2:Hg19::chr11:34816713..34816719,-#_453a393677589f9941730e119b6ff499p@chr11:34816713..34816719, -
9.37e-99FFCP PHASE1:Hg19::chr20:43838283..43838286,+#_453a393677589f9941730e119b6ff499p@chr20:43838283..43838286, +
9.37e-99FFCP PHASE1:Hg19::chr19:15739153..15739175,+#_453a393677589f9941730e119b6ff499p@chr19:15739153..15739175, +
9.37e-99FFCP PHASE1:Hg19::chr20:43851172..43851181,+#_453a393677589f9941730e119b6ff499p@chr20:43851172..43851181, +
9.37e-99FFCP PHASE2:Hg19::chr20:43837304..43837314,+#_453a393677589f9941730e119b6ff499p@chr20:43837304..43837314, +
9.37e-99FFCP PHASE2:Hg19::chr19:15733422..15733428,+#_453a393677589f9941730e119b6ff499p@chr19:15733422..15733428, +
9.37e-99FFCP PHASE1:Hg19::chr20:43837135..43837167,+#_453a393677589f9941730e119b6ff499p@chr20:43837135..43837167, +
9.37e-99FFCP PHASE2:Hg19::chr7:142836239..142836244,+#_453a393677589f9941730e119b6ff499p@chr7:142836239..142836244, +
9.37e-99FFCP PHASE1:Hg19::chr19:15731181..15731184,+#_453a393677589f9941730e119b6ff499p@chr19:15731181..15731184, +
9.37e-99FFCP PHASE2:Hg19::chr20:43851935..43851976,+#_453a393677589f9941730e119b6ff499p@chr20:43851935..43851976, +
9.37e-99FFCP PHASE1:Hg19::chr20:43850844..43850864,+#_453a393677589f9941730e119b6ff499p@chr20:43850844..43850864, +
9.37e-99FFCP PHASE2:Hg19::chr19:15730000..15730004,+#_453a393677589f9941730e119b6ff499p@chr19:15730000..15730004, +
9.37e-99FFCP PHASE1:Hg19::chr20:43852004..43852005,+#_453a393677589f9941730e119b6ff499p@chr20:43852004..43852005, +
9.37e-99FFCP PHASE2:Hg19::chr20:43850750..43850755,+#_453a393677589f9941730e119b6ff499p@chr20:43850750..43850755, +
9.37e-99FFCP PHASE1:Hg19::chr20:43836736..43836753,+#_453a393677589f9941730e119b6ff499p@chr20:43836736..43836753, +
9.37e-99FFCP PHASE1:Hg19::chr19:15728853..15728859,+#_453a393677589f9941730e119b6ff499p@chr19:15728853..15728859, +
9.37e-99FFCP PHASE2:Hg19::chr20:43851568..43851570,+#_453a393677589f9941730e119b6ff499p@chr20:43851568..43851570, +
9.37e-99FFCP PHASE1:Hg19::chr20:43850565..43850590,+#_453a393677589f9941730e119b6ff499p@chr20:43850565..43850590, +
9.37e-99FFCP PHASE2:Hg19::chr19:15706318..15706336,+#_453a393677589f9941730e119b6ff499p@chr19:15706318..15706336, +
9.37e-99FFCP PHASE1:Hg19::chr20:43851737..43851742,+#_453a393677589f9941730e119b6ff499p@chr20:43851737..43851742, +
9.37e-99FFCP PHASE2:Hg19::chr11:1025034..1025037,-#_453a393677589f9941730e119b6ff499p@chr11:1025034..1025037, -
9.37e-99FFCP PHASE2:Hg19::chr20:43851312..43851315,+#_453a393677589f9941730e119b6ff499p@chr20:43851312..43851315, +
9.37e-99FFCP PHASE1:Hg19::chr11:1030990..1030995,-#_453a393677589f9941730e119b6ff499p@chr11:1030990..1030995, -
9.37e-99FFCP PHASE1:Hg19::chr20:40980960..40980970,-#_453a393677589f9941730e119b6ff499p@chr20:40980960..40980970, -
9.37e-99FFCP PHASE1:Hg19::chr20:43851377..43851400,+#_453a393677589f9941730e119b6ff499p@chr20:43851377..43851400, +
9.37e-99FFCP PHASE2:Hg19::chr20:43838313..43838327,+#_453a393677589f9941730e119b6ff499p@chr20:43838313..43838327, +
9.37e-99FFCP PHASE1:Hg19::chr20:43853036..43853043,+#_453a393677589f9941730e119b6ff499p@chr20:43853036..43853043, +
9.37e-99FFCP PHASE2:Hg19::chr20:43850927..43850931,+#_453a393677589f9941730e119b6ff499p@chr20:43850927..43850931, +
9.37e-99FFCP PHASE1:Hg19::chr20:43837295..43837300,+#_453a393677589f9941730e119b6ff499p@chr20:43837295..43837300, +
9.37e-99FFCP PHASE1:Hg19::chr19:15733200..15733213,+#_453a393677589f9941730e119b6ff499p@chr19:15733200..15733213, +
9.37e-99FFCP PHASE2:Hg19::chr20:43852949..43852953,+#_453a393677589f9941730e119b6ff499p@chr20:43852949..43852953, +
9.37e-99FFCP PHASE1:Hg19::chr11:34816713..34816719,-#_453a393677589f9941730e119b6ff499p@chr11:34816713..34816719, -
9.37e-99FFCP PHASE1:Hg19::chr20:43851080..43851084,+#_453a393677589f9941730e119b6ff499p@chr20:43851080..43851084, +
9.37e-99FFCP PHASE2:Hg19::chr20:43837223..43837282,+#_453a393677589f9941730e119b6ff499p@chr20:43837223..43837282, +
9.37e-99FFCP PHASE2:Hg19::chr11:1023637..1023640,-#_453a393677589f9941730e119b6ff499p@chr11:1023637..1023640, -
9.37e-99FFCP PHASE1:Hg19::chr20:43836939..43836958,+#_453a393677589f9941730e119b6ff499p@chr20:43836939..43836958, +
9.37e-99FFCP PHASE2:Hg19::chr20:43836085..43836090,+#_453a393677589f9941730e119b6ff499p@chr20:43836085..43836090, +
9.37e-99FFCP PHASE1:Hg19::chr19:15729943..15729948,+#_453a393677589f9941730e119b6ff499p@chr19:15729943..15729948, +
9.37e-99FFCP PHASE2:Hg19::chr20:43851758..43851791,+#_453a393677589f9941730e119b6ff499p@chr20:43851758..43851791, +
9.37e-99FFCP PHASE2:Hg19::chr19:15728999..15729014,+#_453a393677589f9941730e119b6ff499p@chr19:15728999..15729014, +
9.37e-99FFCP PHASE1:Hg19::chr20:43851914..43851932,+#_453a393677589f9941730e119b6ff499p@chr20:43851914..43851932, +
9.37e-99FFCP PHASE2:Hg19::chr20:43850640..43850649,+#_453a393677589f9941730e119b6ff499p@chr20:43850640..43850649, +
9.37e-99FFCP PHASE1:Hg19::chr19:15703376..15703385,-#_453a393677589f9941730e119b6ff499p@chr19:15703376..15703385, -
9.37e-99FFCP PHASE2:Hg19::chr20:43851436..43851450,+#_453a393677589f9941730e119b6ff499p@chr20:43851436..43851450, +
9.37e-99FFCP PHASE1:Hg19::chr20:43850450..43850493,+#_453a393677589f9941730e119b6ff499p@chr20:43850450..43850493, +
9.37e-99FFCP PHASE1:Hg19::chr20:43851532..43851542,+#_453a393677589f9941730e119b6ff499p@chr20:43851532..43851542, +
9.37e-99FFCP PHASE2:Hg19::chr20:43850403..43850416,+#_453a393677589f9941730e119b6ff499p@chr20:43850403..43850416, +
9.37e-99FFCP PHASE2:Hg19::chr20:43851110..43851138,+#_453a393677589f9941730e119b6ff499p@chr20:43851110..43851138, +
9.37e-99FFCP PHASE2:Hg19::chr11:34841932..34841939,+#_453a393677589f9941730e119b6ff499p@chr11:34841932..34841939, +
9.37e-99FFCP PHASE1:Hg19::chr20:43838296..43838299,+#_453a393677589f9941730e119b6ff499p@chr20:43838296..43838299, +
9.37e-99FFCP PHASE1:Hg19::chr11:1025034..1025037,-#_453a393677589f9941730e119b6ff499p@chr11:1025034..1025037, -
9.37e-99FFCP PHASE1:Hg19::chr20:43851184..43851194,+#_453a393677589f9941730e119b6ff499p@chr20:43851184..43851194, +
9.37e-99FFCP PHASE2:Hg19::chr20:43837317..43837329,+#_453a393677589f9941730e119b6ff499p@chr20:43837317..43837329, +
9.37e-99FFCP PHASE2:Hg19::chr19:15734133..15734157,+#_453a393677589f9941730e119b6ff499p@chr19:15734133..15734157, +
9.37e-99FFCP PHASE1:Hg19::chr20:43837196..43837202,+#_453a393677589f9941730e119b6ff499p@chr20:43837196..43837202, +
9.37e-99FFCP PHASE2:Hg19::chr20:43836142..43836161,+#_453a393677589f9941730e119b6ff499p@chr20:43836142..43836161, +
9.37e-99FFCP PHASE1:Hg19::chr11:1023637..1023640,-#_453a393677589f9941730e119b6ff499p@chr11:1023637..1023640, -
9.37e-99FFCP PHASE2:Hg19::chr20:43851992..43851993,+#_453a393677589f9941730e119b6ff499p@chr20:43851992..43851993, +
9.37e-99FFCP PHASE1:Hg19::chr20:43850865..43850873,+#_453a393677589f9941730e119b6ff499p@chr20:43850865..43850873, +
9.37e-99FFCP PHASE2:Hg19::chr19:15730135..15730149,+#_453a393677589f9941730e119b6ff499p@chr19:15730135..15730149, +
9.37e-99FFCP PHASE1:Hg19::chr20:43852924..43852944,+#_453a393677589f9941730e119b6ff499p@chr20:43852924..43852944, +
9.37e-99FFCP PHASE1:Hg19::chr20:43836755..43836769,+#_453a393677589f9941730e119b6ff499p@chr20:43836755..43836769, +
9.37e-99FFCP PHASE1:Hg19::chr3:46485058..46485065,-#_453a393677589f9941730e119b6ff499p1@AK126237
9.37e-99FFCP PHASE2:Hg19::chr20:43851679..43851707,+#_453a393677589f9941730e119b6ff499p@chr20:43851679..43851707, +
9.37e-99FFCP PHASE1:Hg19::chr20:43850628..43850633,+#_453a393677589f9941730e119b6ff499p@chr20:43850628..43850633, +
9.37e-99FFCP PHASE1:Hg19::chr15:91849967..91849970,+#_453a393677589f9941730e119b6ff499p@chr15:91849967..91849970, +
9.37e-99FFCP PHASE1:Hg19::chr20:43836066..43836075,-#_453a393677589f9941730e119b6ff499p@chr20:43836066..43836075, -
9.37e-99FFCP PHASE1:Hg19::chr20:43851747..43851752,+#_453a393677589f9941730e119b6ff499p@chr20:43851747..43851752, +
9.37e-99FFCP PHASE2:Hg19::chr20:43850531..43850538,+#_453a393677589f9941730e119b6ff499p@chr20:43850531..43850538, +
9.37e-99FFCP PHASE2:Hg19::chr10:98351232..98351244,+#_453a393677589f9941730e119b6ff499p@chr10:98351232..98351244, +
9.37e-99FFCP PHASE2:Hg19::chr19:20265757..20265766,+#_453a393677589f9941730e119b6ff499p@chr19:20265757..20265766, +
9.37e-99FFCP PHASE2:Hg19::chr20:43851326..43851348,+#_453a393677589f9941730e119b6ff499p@chr20:43851326..43851348, +
9.37e-99FFCP PHASE1:Hg19::chr20:43850370..43850384,+#_453a393677589f9941730e119b6ff499p@chr20:43850370..43850384, +