UBERON:0001000
From FANTOM5_SSTAR
Name: | vas deferens | ||
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Namespace: | FANTOM | ||
Definition: | "duct that transports sperm from the testis. In mammals this is from the epididymis." [Wikipedia:Vas_deferens] | ||
Xrefs: |
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Synonyms: |
"deferent duct" EXACT [] "ductus deferens" EXACT [Wikipedia:Vas_deferens] "sperm duct" RELATED [] "vas deferen" EXACT [] "vasa deferentia" RELATED [] | ||
Comments: | Taxon notes (from WP): Most vertebrates have some form of duct to transfer the sperm from the testes to the urethra. In cartilaginous fish and amphibians, sperm is carried through the archinephric duct, which also partially helps to transport urine from the kidneys. In teleosts, there is a distinct sperm duct, separate from the ureters, and often called the vas deferens, although probably not truly homologous with that in humans. In cartilaginous fishes, the part of the archinephric duct closest to the testis is coiled up to form an epididymis. Below this are a number of small glands secreting components of the seminal fluid. The final portion of the duct also receives ducts from the kidneys in most species. In amniotes, however, the archinephric duct has become a true vas deferens, and is used only for conducting sperm, never urine. As in cartilaginous fish, the upper part of the duct forms the epididymis. In many species, the vas deferens ends in a small sac for storing sperm. The only vertebrates to lack any structure resembling a vas deferens are the primitive jawless fishes, which release sperm directly into the body cavity, and then into the surrounding water through a simple opening in the body wall. | ||
Alt_id: | UBERON:FBbt_00004968-FMA_19234-MA_0000413-MIAA_0000129-WBbt_0005337 | ||
Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0005904(duct of male reproductive system) |
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part_of: | UBERON:0005352(spermatic cord),UBERON:0006947(male genital duct) |
Children
derives from: | FF:0010196 (human ductus deferens - adult sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10196-103E7 (ductus deferens, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001000 (vas deferens), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
9.37e-99 | FFCP PHASE2:Hg19::chr20:43835380..43835384,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p2@SEMG1, p3@SEMG2 |
9.37e-99 | FFCP PHASE1:Hg19::chr19:15732081..15732088,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr19:15732081..15732088, + |
9.37e-99 | FFCP PHASE1:Hg19::chr20:43836544..43836571,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836544..43836571, - |
9.37e-99 | FFCP PHASE1:Hg19::chr20:43836329..43836334,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836329..43836334, - |
9.37e-99 | FFCP PHASE2:Hg19::chr4:42942084..42942100,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr4:42942084..42942100, + |
9.37e-99 | FFCP PHASE2:Hg19::chr20:43836225..43836234,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836225..43836234, - |
9.37e-99 | FFCP PHASE2:Hg19::chr20:43853046..43853053,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43853046..43853053, + |
9.37e-99 | FFCP PHASE2:Hg19::chr19:15731989..15732000,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr19:15731989..15732000, + |
9.37e-99 | FFCP PHASE2:Hg19::chr20:43836942..43836962,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836942..43836962, - |
9.37e-99 | FFCP PHASE1:Hg19::chr1:25179461..25179463,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr1:25179461..25179463, + |
9.37e-99 | FFCP PHASE2:Hg19::chr2:219942197..219942226,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr2:219942197..219942226, + |
9.37e-99 | FFCP PHASE1:Hg19::chr20:43836696..43836705,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836696..43836705, - |
9.37e-99 | FFCP PHASE2:Hg19::chr20:43850505..43850516,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43850505..43850516, - |
9.37e-99 | FFCP PHASE1:Hg19::chr20:43836486..43836506,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836486..43836506, - |
9.37e-99 | FFCP PHASE1:Hg19::chr2:223648293..223648295,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr2:223648293..223648295, + |
9.37e-99 | FFCP PHASE1:Hg19::chr20:43836912..43836919,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836912..43836919, - |
9.37e-99 | FFCP PHASE2:Hg19::chr20:43836771..43836789,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836771..43836789, - |
9.37e-99 | FFCP PHASE2:Hg19::chr15:91849918..91849931,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr15:91849918..91849931, + |
9.37e-99 | FFCP PHASE2:Hg19::chr20:43836518..43836524,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836518..43836524, - |
9.37e-99 | FFCP PHASE1:Hg19::chr20:43836170..43836181,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836170..43836181, - |
9.37e-99 | FFCP PHASE2:Hg19::chr11:1032745..1032750,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr11:1032745..1032750, - |
9.37e-99 | FFCP PHASE1:Hg19::chr6:70856430..70856440,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr6:70856430..70856440, + |
9.37e-99 | FFCP PHASE2:Hg19::chr19:15732081..15732088,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr19:15732081..15732088, + |
9.37e-99 | FFCP PHASE1:Hg19::chr11:1032745..1032750,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr11:1032745..1032750, - |
9.37e-99 | FFCP PHASE1:Hg19::chr1:26217127..26217131,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr1:26217127..26217131, + |
9.37e-99 | FFCP PHASE1:Hg19::chr20:43853005..43853012,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43853005..43853012, + |
9.37e-99 | FFCP PHASE2:Hg19::chr12:126515178..126515204,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr12:126515178..126515204, + |
9.37e-99 | FFCP PHASE2:Hg19::chr20:43836329..43836334,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836329..43836334, - |
9.37e-99 | FFCP PHASE2:Hg19::chr20:43836666..43836681,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836666..43836681, - |
9.37e-99 | FFCP PHASE2:Hg19::chr20:43838343..43838355,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43838343..43838355, + |
9.37e-99 | FFCP PHASE1:Hg19::chr11:34592440..34592452,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p1@ENST00000527135 |
9.37e-99 | FFCP PHASE1:Hg19::chr20:43836267..43836284,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836267..43836284, - |
9.37e-99 | FFCP PHASE1:Hg19::chr5:179511281..179511283,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr5:179511281..179511283, + |
9.37e-99 | FFCP PHASE1:Hg19::chr20:43836115..43836122,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836115..43836122, - |
9.37e-99 | FFCP PHASE2:Hg19::chr1:25179461..25179463,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr1:25179461..25179463, + |
9.37e-99 | FFCP PHASE1:Hg19::chr2:18887940..18887947,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr2:18887940..18887947, + |
9.37e-99 | FFCP PHASE1:Hg19::chr20:43836620..43836625,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836620..43836625, - |
9.37e-99 | FFCP PHASE2:Hg19::chr10:25623518..25623540,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr10:25623518..25623540, - |
9.37e-99 | FFCP PHASE2:Hg19::chr20:43836486..43836506,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836486..43836506, - |
9.37e-99 | FFCP PHASE2:Hg19::chr15:91849948..91849962,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr15:91849948..91849962, + |
9.37e-99 | FFCP PHASE2:Hg19::chr20:43836544..43836571,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836544..43836571, - |
9.37e-99 | FFCP PHASE2:Hg19::chr2:223648293..223648295,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr2:223648293..223648295, + |
9.37e-99 | FFCP PHASE2:Hg19::chr11:34592440..34592452,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p1@ENST00000527135 |
9.37e-99 | FFCP PHASE1:Hg19::chr4:42942084..42942100,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr4:42942084..42942100, + |
9.37e-99 | FFCP PHASE1:Hg19::chr15:91849918..91849931,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr15:91849918..91849931, + |
9.37e-99 | FFCP PHASE2:Hg19::chr20:43836696..43836705,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836696..43836705, - |
9.37e-99 | FFCP PHASE1:Hg19::chrX:152622610..152622615,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chrX:152622610..152622615, + |
9.37e-99 | FFCP PHASE1:Hg19::chr20:43836287..43836295,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836287..43836295, - |
9.37e-99 | FFCP PHASE2:Hg19::chr20:43836170..43836181,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836170..43836181, - |
9.37e-99 | FFCP PHASE2:Hg19::chr6:70856430..70856440,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr6:70856430..70856440, + |
9.37e-99 | FFCP PHASE1:Hg19::chr11:30182693..30182698,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr11:30182693..30182698, - |
9.37e-99 | FFCP PHASE1:Hg19::chr20:43836942..43836962,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836942..43836962, - |
9.37e-99 | FFCP PHASE2:Hg19::chr1:26217127..26217131,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr1:26217127..26217131, + |
9.37e-99 | FFCP PHASE2:Hg19::chr20:43853005..43853012,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43853005..43853012, + |
9.37e-99 | FFCP PHASE1:Hg19::chr20:43835380..43835384,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p2@SEMG1, p3@SEMG2 |
9.37e-99 | FFCP PHASE1:Hg19::chr20:43850505..43850516,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43850505..43850516, - |
9.37e-99 | FFCP PHASE2:Hg19::chr20:43836912..43836919,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836912..43836919, - |
9.37e-99 | FFCP PHASE2:Hg19::chr20:43836267..43836284,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836267..43836284, - |
9.37e-99 | FFCP PHASE2:Hg19::chr2:18887940..18887947,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr2:18887940..18887947, + |
9.37e-99 | FFCP PHASE1:Hg19::chr20:43836225..43836234,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836225..43836234, - |
9.37e-99 | FFCP PHASE2:Hg19::chr5:179511281..179511283,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr5:179511281..179511283, + |
9.37e-99 | FFCP PHASE2:Hg19::chr20:43836115..43836122,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836115..43836122, - |
9.37e-99 | FFCP PHASE1:Hg19::chr10:25623518..25623540,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr10:25623518..25623540, - |
9.37e-99 | FFCP PHASE2:Hg19::chr11:30182693..30182698,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr11:30182693..30182698, - |
9.37e-99 | FFCP PHASE1:Hg19::chr20:43853046..43853053,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43853046..43853053, + |
9.37e-99 | FFCP PHASE1:Hg19::chr20:43836771..43836789,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836771..43836789, - |
9.37e-99 | FFCP PHASE1:Hg19::chr19:15731989..15732000,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr19:15731989..15732000, + |
9.37e-99 | FFCP PHASE1:Hg19::chr2:219942197..219942226,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr2:219942197..219942226, + |
9.37e-99 | FFCP PHASE1:Hg19::chr20:43836518..43836524,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836518..43836524, - |
9.37e-99 | FFCP PHASE1:Hg19::chr15:91849948..91849962,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr15:91849948..91849962, + |
9.37e-99 | FFCP PHASE1:Hg19::chr12:126515178..126515204,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr12:126515178..126515204, + |
9.37e-99 | FFCP PHASE1:Hg19::chr20:43836666..43836681,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836666..43836681, - |
9.37e-99 | FFCP PHASE2:Hg19::chrX:152622610..152622615,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chrX:152622610..152622615, + |
9.37e-99 | FFCP PHASE2:Hg19::chr20:43836287..43836295,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836287..43836295, - |
9.37e-99 | FFCP PHASE1:Hg19::chr20:43838343..43838355,+#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43838343..43838355, + |
9.37e-99 | FFCP PHASE2:Hg19::chr20:43836620..43836625,-#_f5f8fb71caeaa0af11fbf434c3e0426d | p@chr20:43836620..43836625, - |
2.55e-98 | FFCP PHASE1:Hg19::chr20:43850651..43850662,+#_33b92fa9a57a5a2285608df99a96ebc7 | p@chr20:43850651..43850662, + |
2.55e-98 | FFCP PHASE2:Hg19::chr20:43837196..43837202,+#_33b92fa9a57a5a2285608df99a96ebc7 | p@chr20:43837196..43837202, + |
2.55e-98 | FFCP PHASE2:Hg19::chr20:43850865..43850873,+#_33b92fa9a57a5a2285608df99a96ebc7 | p@chr20:43850865..43850873, + |
2.55e-98 | FFCP PHASE2:Hg19::chr11:1030990..1030995,-#_33b92fa9a57a5a2285608df99a96ebc7 | p@chr11:1030990..1030995, - |
2.55e-98 | FFCP PHASE1:Hg19::chr5:74191783..74191795,-#_33b92fa9a57a5a2285608df99a96ebc7 | p20@FAM169A |
2.55e-98 | FFCP PHASE1:Hg19::chr20:123140..123152,+#_33b92fa9a57a5a2285608df99a96ebc7 | p3@DEFB126 |
2.55e-98 | FFCP PHASE2:Hg19::chr20:43852924..43852944,+#_33b92fa9a57a5a2285608df99a96ebc7 | p@chr20:43852924..43852944, + |
2.55e-98 | FFCP PHASE2:Hg19::chr19:15729943..15729948,+#_33b92fa9a57a5a2285608df99a96ebc7 | p@chr19:15729943..15729948, + |
2.55e-98 | FFCP PHASE1:Hg19::chr11:1030990..1030995,-#_33b92fa9a57a5a2285608df99a96ebc7 | p@chr11:1030990..1030995, - |
2.55e-98 | FFCP PHASE2:Hg19::chr16:3193483..3193528,+#_33b92fa9a57a5a2285608df99a96ebc7 | p@chr16:3193483..3193528, + |
2.55e-98 | FFCP PHASE2:Hg19::chr9:132204351..132204358,-#_33b92fa9a57a5a2285608df99a96ebc7 | p@chr9:132204351..132204358, - |
2.55e-98 | FFCP PHASE2:Hg19::chr20:43850628..43850633,+#_33b92fa9a57a5a2285608df99a96ebc7 | p@chr20:43850628..43850633, + |
2.55e-98 | FFCP PHASE1:Hg19::chr20:43851992..43851993,+#_33b92fa9a57a5a2285608df99a96ebc7 | p@chr20:43851992..43851993, + |
2.55e-98 | FFCP PHASE1:Hg19::chr19:15728999..15729014,+#_33b92fa9a57a5a2285608df99a96ebc7 | p@chr19:15728999..15729014, + |
2.55e-98 | FFCP PHASE2:Hg19::chr20:43851747..43851752,+#_33b92fa9a57a5a2285608df99a96ebc7 | p@chr20:43851747..43851752, + |
2.55e-98 | FFCP PHASE2:Hg19::chr19:15703376..15703385,-#_33b92fa9a57a5a2285608df99a96ebc7 | p@chr19:15703376..15703385, - |
2.55e-98 | FFCP PHASE1:Hg19::chr20:43850418..43850438,+#_33b92fa9a57a5a2285608df99a96ebc7 | p@chr20:43850418..43850438, + |
2.55e-98 | FFCP PHASE1:Hg19::chr15:91849967..91849970,+#_33b92fa9a57a5a2285608df99a96ebc7 | p@chr15:91849967..91849970, + |
2.55e-98 | FFCP PHASE2:Hg19::chr20:43836755..43836769,+#_33b92fa9a57a5a2285608df99a96ebc7 | p@chr20:43836755..43836769, + |
2.55e-98 | FFCP PHASE2:Hg19::chr1:182369766..182369777,-#_33b92fa9a57a5a2285608df99a96ebc7 | p1@TEDDM1 |
2.55e-98 | FFCP PHASE2:Hg19::chr10:102505901..102505907,+#_33b92fa9a57a5a2285608df99a96ebc7 | p13@PAX2 |
2.55e-98 | FFCP PHASE1:Hg19::chr20:43851142..43851164,+#_33b92fa9a57a5a2285608df99a96ebc7 | p@chr20:43851142..43851164, + |
2.55e-98 | FFCP PHASE2:Hg19::chr20:43850370..43850384,+#_33b92fa9a57a5a2285608df99a96ebc7 | p@chr20:43850370..43850384, + |
2.55e-98 | FFCP PHASE1:Hg19::chr6:46159025..46159070,+#_33b92fa9a57a5a2285608df99a96ebc7 | p@chr6:46159025..46159070, + |