UBERON:0001601
From FANTOM5_SSTAR
| Name: | extra-ocular muscle | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Skeletal muscle derived from cranial mesoderm and controls eye movements." [GO:0002074, Wikipedia:Extraocular_muscles] | ||
| Xrefs: |
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| Synonyms: |
"extra-ocular skeletal muscle" EXACT [] "extraocular muscle" EXACT [FMA:49033] "extraocular musculature" EXACT [ZFA:0000511] "extraocular skeletal muscle" EXACT [MA:0001271] "extrinsic eye muscle" EXACT [Obol:automatic] "extrinsic muscle of eyeball" EXACT [FMA:49033] "extrinsic ocular muscle" EXACT [EHDAA2:0000482] "musculi externi bulbi oculi" RELATED LATIN [Wikipedia:Extraocular_muscles] | ||
| Comments: | AO notes: BTO and MA consider this part of the eye; we follow them here (inferred from skeletal muscle). Not clear if omission from FMA is deliberate. Editor notes: todo - resolve discrepancies in which muscles are considered extra-ocular. Taxon notes: Mammals have 7 extra-ocular muscles, but humans lack the M. retractor bulbi. Note in ZFA this is the set of muscles. | ||
| Alt_id: |
UBERON:0006229 UBERON:FMA_49033-MA_0000271 | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
| is_a: | UBERON:0004120(mesoderm-derived structure),UBERON:0004277(eye muscle),UBERON:0010313(neural crest-derived structure) |
|---|---|
| develops_from: | UBERON:0006230(extrinsic ocular pre-muscle mass) |
| part_of: | UBERON:0003269(skeletal muscle tissue of eye) |
Children
| is a: | UBERON:0006531 (oculomotor muscle) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10272-104E2 (eye - muscle inferior rectus, donor1)
- 10300-104H3
- 10328-105B4
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001601 (extra-ocular muscle), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
No analysis results
Property "Property value" (as page type) with input value "UBPROP:0000001 "Muscles surrounding the eye (bulbus oculi) and having an effect on eye movements.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
