UBERON:0001601
From FANTOM5_SSTAR
Name: | extra-ocular muscle | ||
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Namespace: | FANTOM | ||
Definition: | "Skeletal muscle derived from cranial mesoderm and controls eye movements." [GO:0002074, Wikipedia:Extraocular_muscles] | ||
Xrefs: |
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Synonyms: |
"extra-ocular skeletal muscle" EXACT [] "extraocular muscle" EXACT [FMA:49033] "extraocular musculature" EXACT [ZFA:0000511] "extraocular skeletal muscle" EXACT [MA:0001271] "extrinsic eye muscle" EXACT [Obol:automatic] "extrinsic muscle of eyeball" EXACT [FMA:49033] "extrinsic ocular muscle" EXACT [EHDAA2:0000482] "musculi externi bulbi oculi" RELATED LATIN [Wikipedia:Extraocular_muscles] | ||
Comments: | AO notes: BTO and MA consider this part of the eye; we follow them here (inferred from skeletal muscle). Not clear if omission from FMA is deliberate. Editor notes: todo - resolve discrepancies in which muscles are considered extra-ocular. Taxon notes: Mammals have 7 extra-ocular muscles, but humans lack the M. retractor bulbi. Note in ZFA this is the set of muscles. | ||
Alt_id: |
UBERON:0006229 UBERON:FMA_49033-MA_0000271 | ||
Subset: |
uberon_slim vertebrate_core |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0004120(mesoderm-derived structure),UBERON:0004277(eye muscle),UBERON:0010313(neural crest-derived structure) |
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develops_from: | UBERON:0006230(extrinsic ocular pre-muscle mass) |
part_of: | UBERON:0003269(skeletal muscle tissue of eye) |
Children
is a: | UBERON:0006531 (oculomotor muscle) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10272-104E2 (eye - muscle inferior rectus, donor1)
- 10300-104H3
- 10328-105B4
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001601 (extra-ocular muscle), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
No analysis results
Property "Property value" (as page type) with input value "UBPROP:0000001 "Muscles surrounding the eye (bulbus oculi) and having an effect on eye movements.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.