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UBERON:0001630

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Name:muscle organ
Namespace:FANTOM
Definition:"Organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work[GO]. Nonparenchymatous organ that primarily consists of skeletal muscle tissue aggregated into macroscopic fasciculi by connective tissue; together with other muscles, it constitutes the muscular system. Examples: biceps, diaphragm, masseter, right third external intercostal muscle, external oblique, levator ani, serratus anterior[FMA]." [GO:0007517]
Xrefs:
links:

AAO:0011066
BTO:0001103
EMAPA:18187
EMAPA:18923
EV:0100146
FMA:5022
GAID:131
galen:Muscle
MA:0000015
OpenCyc:Mx4rv2kf-5wpEbGdrcN5Y29ycA
SCTID:71616004
TAO:0005145
VHOG:0001245
XAO:0000172

ZFA:0005145
Synonyms: "muscle" EXACT [ZFA:0005145]
"skeletal muscle system" RELATED [BTO:0001103]
"somatic muscle" RELATED [BTO:0001103]
Alt_id: UBERON:FMA_5022-MIAA_0000302-XAO_0000174
Subset: organ_slim
uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000062(organ),UBERON:0005090(muscle structure)
part_of:UBERON:0001015(musculature)



Children

is a:UBERON:0001665 (triceps surae),UBERON:0001774 (muscle of trunk),UBERON:0002463 (hamstring muscle),UBERON:0003831 (respiratory system muscle),UBERON:0004277 (eye muscle),UBERON:0014892 (skeletal muscle organ)
disjoint from:UBERON:0001474 (bone element)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001630 (muscle organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
4.61e-131FFCP PHASE2:Hg19::chr10:99343436..99343448,+#_6114feeb7c13a75d03119886aa9e2577p@chr10:99343436..99343448, +
4.61e-131FFCP PHASE2:Hg19::chr19:50997736..50997745,-#_6114feeb7c13a75d03119886aa9e2577p@chr19:50997736..50997745, -
4.61e-131FFCP PHASE1:Hg19::chr2:179588230..179588237,-#_6114feeb7c13a75d03119886aa9e2577p@chr2:179588230..179588237, -
4.61e-131FFCP PHASE1:Hg19::chr15:99548796..99548805,-#_6114feeb7c13a75d03119886aa9e2577p3@PGPEP1L
4.61e-131FFCP PHASE1:Hg19::chr2:179548750..179548755,-#_6114feeb7c13a75d03119886aa9e2577p@chr2:179548750..179548755, -
4.61e-131FFCP PHASE2:Hg19::chr2:179542420..179542428,-#_6114feeb7c13a75d03119886aa9e2577p@chr2:179542420..179542428, -
4.61e-131FFCP PHASE2:Hg19::chr19:50994855..50994864,-#_6114feeb7c13a75d03119886aa9e2577p@chr19:50994855..50994864, -
4.61e-131FFCP PHASE2:Hg19::chr15:99548796..99548805,-#_6114feeb7c13a75d03119886aa9e2577p3@PGPEP1L
4.61e-131FFCP PHASE1:Hg19::chr10:99343436..99343448,+#_6114feeb7c13a75d03119886aa9e2577p@chr10:99343436..99343448, +
4.61e-131FFCP PHASE1:Hg19::chr19:50997736..50997745,-#_6114feeb7c13a75d03119886aa9e2577p@chr19:50997736..50997745, -
4.61e-131FFCP PHASE1:Hg19::chr2:179542420..179542428,-#_6114feeb7c13a75d03119886aa9e2577p@chr2:179542420..179542428, -
4.61e-131FFCP PHASE1:Hg19::chr19:50994855..50994864,-#_6114feeb7c13a75d03119886aa9e2577p@chr19:50994855..50994864, -
4.61e-131FFCP PHASE2:Hg19::chr2:179588230..179588237,-#_6114feeb7c13a75d03119886aa9e2577p@chr2:179588230..179588237, -
4.61e-131FFCP PHASE2:Hg19::chr2:179548750..179548755,-#_6114feeb7c13a75d03119886aa9e2577p@chr2:179548750..179548755, -
8.99e-131FFCP PHASE1:Hg19::chr2:168105377..168105386,+#_da129e98a6cc20dc40dd5ccf779126d6p28@XIRP2
8.99e-131FFCP PHASE1:Hg19::chr2:152419209..152419216,-#_da129e98a6cc20dc40dd5ccf779126d6p@chr2:152419209..152419216, -
8.99e-131FFCP PHASE1:Hg19::chr12:102075405..102075407,+#_da129e98a6cc20dc40dd5ccf779126d6p@chr12:102075405..102075407, +
8.99e-131FFCP PHASE1:Hg19::chr2:152342364..152342373,-#_da129e98a6cc20dc40dd5ccf779126d6p@chr2:152342364..152342373, -
8.99e-131FFCP PHASE2:Hg19::chr12:102075405..102075407,+#_da129e98a6cc20dc40dd5ccf779126d6p@chr12:102075405..102075407, +
8.99e-131FFCP PHASE2:Hg19::chr2:152514527..152514536,-#_da129e98a6cc20dc40dd5ccf779126d6p@chr2:152514527..152514536, -
8.99e-131FFCP PHASE2:Hg19::chr2:152476098..152476105,-#_da129e98a6cc20dc40dd5ccf779126d6p@chr2:152476098..152476105, -
8.99e-131FFCP PHASE2:Hg19::chr2:168106984..168106993,+#_da129e98a6cc20dc40dd5ccf779126d6p34@XIRP2
8.99e-131FFCP PHASE2:Hg19::chr2:168105377..168105386,+#_da129e98a6cc20dc40dd5ccf779126d6p28@XIRP2
8.99e-131FFCP PHASE2:Hg19::chr2:152419209..152419216,-#_da129e98a6cc20dc40dd5ccf779126d6p@chr2:152419209..152419216, -
8.99e-131FFCP PHASE1:Hg19::chr2:152514527..152514536,-#_da129e98a6cc20dc40dd5ccf779126d6p@chr2:152514527..152514536, -
8.99e-131FFCP PHASE2:Hg19::chr2:152342364..152342373,-#_da129e98a6cc20dc40dd5ccf779126d6p@chr2:152342364..152342373, -
8.99e-131FFCP PHASE1:Hg19::chr2:152476098..152476105,-#_da129e98a6cc20dc40dd5ccf779126d6p@chr2:152476098..152476105, -
8.99e-131FFCP PHASE1:Hg19::chr2:168106984..168106993,+#_da129e98a6cc20dc40dd5ccf779126d6p34@XIRP2
1.75e-130FFCP PHASE1:Hg19::chr2:152393686..152393693,-#_e4a023fed3fd1ad730cf868aa6984f05p@chr2:152393686..152393693, -
1.75e-130FFCP PHASE2:Hg19::chr2:152393686..152393693,-#_e4a023fed3fd1ad730cf868aa6984f05p@chr2:152393686..152393693, -
5.68e-99FFCP PHASE1:Hg19::chr19:45818804..45818807,-#_52947e80235d549da546bbac6182c140p@chr19:45818804..45818807, -
5.68e-99FFCP PHASE1:Hg19::chr2:179399744..179399749,-#_52947e80235d549da546bbac6182c140p@chr2:179399744..179399749, -
5.68e-99FFCP PHASE2:Hg19::chr2:179399074..179399079,-#_52947e80235d549da546bbac6182c140p@chr2:179399074..179399079, -
5.68e-99FFCP PHASE1:Hg19::chr2:179517267..179517276,-#_52947e80235d549da546bbac6182c140p@chr2:179517267..179517276, -
5.68e-99FFCP PHASE2:Hg19::chr2:179397272..179397275,-#_52947e80235d549da546bbac6182c140p143@TTN
5.68e-99FFCP PHASE1:Hg19::chr19:50995069..50995079,-#_52947e80235d549da546bbac6182c140p@chr19:50995069..50995079, -
5.68e-99FFCP PHASE1:Hg19::chr2:179509343..179509355,-#_52947e80235d549da546bbac6182c140p@chr2:179509343..179509355, -
5.68e-99FFCP PHASE2:Hg19::chr2:152522901..152522910,-#_52947e80235d549da546bbac6182c140p@chr2:152522901..152522910, -
5.68e-99FFCP PHASE1:Hg19::chr10:99342361..99342373,+#_52947e80235d549da546bbac6182c140p@chr10:99342361..99342373, +
5.68e-99FFCP PHASE2:Hg19::chr2:168114748..168114758,+#_52947e80235d549da546bbac6182c140p32@XIRP2
5.68e-99FFCP PHASE1:Hg19::chr15:99548808..99548813,-#_52947e80235d549da546bbac6182c140p6@PGPEP1L
5.68e-99FFCP PHASE2:Hg19::chr19:45818804..45818807,-#_52947e80235d549da546bbac6182c140p@chr19:45818804..45818807, -
5.68e-99FFCP PHASE2:Hg19::chr2:179399744..179399749,-#_52947e80235d549da546bbac6182c140p@chr2:179399744..179399749, -
5.68e-99FFCP PHASE1:Hg19::chr2:179399074..179399079,-#_52947e80235d549da546bbac6182c140p@chr2:179399074..179399079, -
5.68e-99FFCP PHASE1:Hg19::chr2:179397272..179397275,-#_52947e80235d549da546bbac6182c140p143@TTN
5.68e-99FFCP PHASE1:Hg19::chr2:152522901..152522910,-#_52947e80235d549da546bbac6182c140p@chr2:152522901..152522910, -
5.68e-99FFCP PHASE2:Hg19::chr15:99548808..99548813,-#_52947e80235d549da546bbac6182c140p6@PGPEP1L
5.68e-99FFCP PHASE2:Hg19::chr2:179517267..179517276,-#_52947e80235d549da546bbac6182c140p@chr2:179517267..179517276, -
5.68e-99FFCP PHASE2:Hg19::chr19:50995069..50995079,-#_52947e80235d549da546bbac6182c140p@chr19:50995069..50995079, -
5.68e-99FFCP PHASE1:Hg19::chr2:168114748..168114758,+#_52947e80235d549da546bbac6182c140p32@XIRP2
5.68e-99FFCP PHASE2:Hg19::chr2:179509343..179509355,-#_52947e80235d549da546bbac6182c140p@chr2:179509343..179509355, -
5.68e-99FFCP PHASE2:Hg19::chr10:99342361..99342373,+#_52947e80235d549da546bbac6182c140p@chr10:99342361..99342373, +
9.38e-99FFCP PHASE2:Hg19::chr2:179529262..179529271,-#_ba192c92360fb4144227915c6ad7bc5dp@chr2:179529262..179529271, -
9.38e-99FFCP PHASE1:Hg19::chrX:21676413..21676421,-#_ba192c92360fb4144227915c6ad7bc5dp4@KLHL34
9.38e-99FFCP PHASE2:Hg19::chr14:20904319..20904328,-#_ba192c92360fb4144227915c6ad7bc5dp@chr14:20904319..20904328, -
9.38e-99FFCP PHASE1:Hg19::chr2:152581419..152581429,+#_ba192c92360fb4144227915c6ad7bc5dp@chr2:152581419..152581429, +
9.38e-99FFCP PHASE1:Hg19::chr2:152544188..152544205,-#_ba192c92360fb4144227915c6ad7bc5dp@chr2:152544188..152544205, -
9.38e-99FFCP PHASE2:Hg19::chr2:168105520..168105527,+#_ba192c92360fb4144227915c6ad7bc5dp45@XIRP2
9.38e-99FFCP PHASE1:Hg19::chr2:179569985..179569993,-#_ba192c92360fb4144227915c6ad7bc5dp@chr2:179569985..179569993, -
9.38e-99FFCP PHASE1:Hg19::chr2:179594654..179594662,-#_ba192c92360fb4144227915c6ad7bc5dp@chr2:179594654..179594662, -
9.38e-99FFCP PHASE2:Hg19::chr19:55644220..55644230,-#_ba192c92360fb4144227915c6ad7bc5dp@chr19:55644220..55644230, -
9.38e-99FFCP PHASE2:Hg19::chrX:21672387..21672391,-#_ba192c92360fb4144227915c6ad7bc5dp@chrX:21672387..21672391, -
9.38e-99FFCP PHASE1:Hg19::chr2:152426665..152426675,-#_ba192c92360fb4144227915c6ad7bc5dp@chr2:152426665..152426675, -
9.38e-99FFCP PHASE2:Hg19::chr12:111351081..111351086,-#_ba192c92360fb4144227915c6ad7bc5dp@chr12:111351081..111351086, -
9.38e-99FFCP PHASE2:Hg19::chr2:152520289..152520294,-#_ba192c92360fb4144227915c6ad7bc5dp@chr2:152520289..152520294, -
9.38e-99FFCP PHASE1:Hg19::chr2:179529262..179529271,-#_ba192c92360fb4144227915c6ad7bc5dp@chr2:179529262..179529271, -
9.38e-99FFCP PHASE1:Hg19::chr19:55644220..55644230,-#_ba192c92360fb4144227915c6ad7bc5dp@chr19:55644220..55644230, -
9.38e-99FFCP PHASE1:Hg19::chr2:168105520..168105527,+#_ba192c92360fb4144227915c6ad7bc5dp45@XIRP2
9.38e-99FFCP PHASE2:Hg19::chrX:21676413..21676421,-#_ba192c92360fb4144227915c6ad7bc5dp4@KLHL34
9.38e-99FFCP PHASE1:Hg19::chrX:21672387..21672391,-#_ba192c92360fb4144227915c6ad7bc5dp@chrX:21672387..21672391, -
9.38e-99FFCP PHASE1:Hg19::chr12:111351081..111351086,-#_ba192c92360fb4144227915c6ad7bc5dp@chr12:111351081..111351086, -
9.38e-99FFCP PHASE2:Hg19::chr2:152581419..152581429,+#_ba192c92360fb4144227915c6ad7bc5dp@chr2:152581419..152581429, +
9.38e-99FFCP PHASE2:Hg19::chr2:152544188..152544205,-#_ba192c92360fb4144227915c6ad7bc5dp@chr2:152544188..152544205, -
9.38e-99FFCP PHASE2:Hg19::chr2:179569985..179569993,-#_ba192c92360fb4144227915c6ad7bc5dp@chr2:179569985..179569993, -
9.38e-99FFCP PHASE2:Hg19::chr2:179594654..179594662,-#_ba192c92360fb4144227915c6ad7bc5dp@chr2:179594654..179594662, -
9.38e-99FFCP PHASE2:Hg19::chr2:152426665..152426675,-#_ba192c92360fb4144227915c6ad7bc5dp@chr2:152426665..152426675, -
9.38e-99FFCP PHASE1:Hg19::chr2:152520289..152520294,-#_ba192c92360fb4144227915c6ad7bc5dp@chr2:152520289..152520294, -
9.38e-99FFCP PHASE1:Hg19::chr14:20904319..20904328,-#_ba192c92360fb4144227915c6ad7bc5dp@chr14:20904319..20904328, -
1.55e-98FFCP PHASE2:Hg19::chr4:85166508..85166512,+#_94244da6056d4207b2201ad2e6164e86p@chr4:85166508..85166512, +
1.55e-98FFCP PHASE1:Hg19::chr2:152383493..152383501,-#_94244da6056d4207b2201ad2e6164e86p@chr2:152383493..152383501, -
1.55e-98FFCP PHASE2:Hg19::chr22:25535147..25535150,+#_94244da6056d4207b2201ad2e6164e86p@chr22:25535147..25535150, +
1.55e-98FFCP PHASE1:Hg19::chr7:128483294..128483304,+#_94244da6056d4207b2201ad2e6164e86p@chr7:128483294..128483304, +
1.55e-98FFCP PHASE2:Hg19::chr2:179396370..179396375,-#_94244da6056d4207b2201ad2e6164e86p@chr2:179396370..179396375, -
1.55e-98FFCP PHASE2:Hg19::chr4:186423235..186423240,-#_94244da6056d4207b2201ad2e6164e86p@chr4:186423235..186423240, -
1.55e-98FFCP PHASE1:Hg19::chr10:97176812..97176813,+#_94244da6056d4207b2201ad2e6164e86p@chr10:97176812..97176813, +
1.55e-98FFCP PHASE1:Hg19::chr10:79759687..79759690,+#_94244da6056d4207b2201ad2e6164e86p@chr10:79759687..79759690, +
1.55e-98FFCP PHASE2:Hg19::chr2:152409955..152409964,-#_94244da6056d4207b2201ad2e6164e86p@chr2:152409955..152409964, -
1.55e-98FFCP PHASE2:Hg19::chr2:76859417..76859418,+#_94244da6056d4207b2201ad2e6164e86p@chr2:76859417..76859418, +
1.55e-98FFCP PHASE1:Hg19::chr11:3691037..3691040,+#_94244da6056d4207b2201ad2e6164e86p@chr11:3691037..3691040, +
1.55e-98FFCP PHASE1:Hg19::chr4:85166508..85166512,+#_94244da6056d4207b2201ad2e6164e86p@chr4:85166508..85166512, +
1.55e-98FFCP PHASE1:Hg19::chr18:10458574..10458579,-#_94244da6056d4207b2201ad2e6164e86p@chr18:10458574..10458579, -
1.55e-98FFCP PHASE2:Hg19::chr18:10458574..10458579,-#_94244da6056d4207b2201ad2e6164e86p@chr18:10458574..10458579, -
1.55e-98FFCP PHASE1:Hg19::chr22:25535147..25535150,+#_94244da6056d4207b2201ad2e6164e86p@chr22:25535147..25535150, +
1.55e-98FFCP PHASE1:Hg19::chr2:179396370..179396375,-#_94244da6056d4207b2201ad2e6164e86p@chr2:179396370..179396375, -
1.55e-98FFCP PHASE1:Hg19::chr12:10871020..10871032,-#_94244da6056d4207b2201ad2e6164e86p26@CSDA
1.55e-98FFCP PHASE1:Hg19::chr4:186423235..186423240,-#_94244da6056d4207b2201ad2e6164e86p@chr4:186423235..186423240, -
1.55e-98FFCP PHASE2:Hg19::chr2:152383493..152383501,-#_94244da6056d4207b2201ad2e6164e86p@chr2:152383493..152383501, -
1.55e-98FFCP PHASE2:Hg19::chr10:97176812..97176813,+#_94244da6056d4207b2201ad2e6164e86p@chr10:97176812..97176813, +
1.55e-98FFCP PHASE2:Hg19::chr12:10871020..10871032,-#_94244da6056d4207b2201ad2e6164e86p26@CSDA
1.55e-98FFCP PHASE2:Hg19::chr7:128483294..128483304,+#_94244da6056d4207b2201ad2e6164e86p@chr7:128483294..128483304, +










Property "Property value" (as page type) with input value "UBPROP:0000001 "Portion of tissue composed of contractile fibers.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.