UBERON:0001758
From FANTOM5_SSTAR
Name: | periodontium | ||
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Namespace: | FANTOM | ||
Definition: | "The tissues that invest or help to invest and support the teeth, including the periodontal ligament, gingivae, cementum, and alveolar and supporting bone[BTO]." [BTO:0001021, Wikipedia:Periodontium] | ||
Xrefs: |
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Synonyms: |
"paradentium" RELATED [MESH:A.14.254.646] "periodontal ligament" RELATED INCONSISTENT [FMA:56665] "periodontal membrane" RELATED [MA:0002467] "tooth supporting structure" RELATED [MESH:A.14.254.646] | ||
Comments: | note FMA treats periodontium and periodontal ligament as the same | ||
Alt_id: | UBERON:FMA_56665-MA_0002467 |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0000479(tissue) |
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part_of: | UBERON:0003672(dentition) |
Children
part of: | CL:0002556 (fibroblast of periodontium) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11223-116B8 (Fibroblast - Periodontal Ligament, donor4 (PL29))
- 11238-116D5 (Fibroblast - Periodontal Ligament, donor1)
- 11304-117B8 (Fibroblast - Periodontal Ligament, donor5 (PL30))
- 11319-117D5 (Fibroblast - Periodontal Ligament, donor2)
- 11380-118B3 (Fibroblast - Periodontal Ligament, donor6 (PLH3))
- 11395-118C9 (Fibroblast - Periodontal Ligament, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001758 (periodontium), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
7.06e-63 | FFCP PHASE1:Hg19::chr1:75598362..75598407,-#_19c8670d68dde466e135758d5df20e7a | p1@ENST00000427892, p1@uc001dgp.1 |
7.06e-63 | FFCP PHASE2:Hg19::chr1:75598362..75598407,-#_19c8670d68dde466e135758d5df20e7a | p1@ENST00000427892, p1@uc001dgp.1 |
1.23e-62 | FFCP PHASE1:Hg19::chr1:75599683..75599699,-#_a6fe15afb18b9ba4988c32de6f3d268d | p@chr1:75599683..75599699, - |
1.23e-62 | FFCP PHASE2:Hg19::chr1:75599683..75599699,-#_a6fe15afb18b9ba4988c32de6f3d268d | -, p@chr1:75599683..75599699 |
2.45e-58 | FFCP PHASE1:Hg19::chr6:707779..707821,+#_4ccc82409135baca1cf00e06ceb1a32c | p@chr6:707779..707821, + |
2.45e-58 | FFCP PHASE2:Hg19::chr6:707779..707821,+#_4ccc82409135baca1cf00e06ceb1a32c | p@chr6:707779..707821, + |
4.63e-53 | FFCP PHASE1:Hg19::chr1:75599672..75599682,-#_2545d83fe9d8060ae2f78feca69a5b01 | p@chr1:75599672..75599682, - |
4.63e-53 | FFCP PHASE2:Hg19::chr1:75599672..75599682,-#_2545d83fe9d8060ae2f78feca69a5b01 | p@chr1:75599672..75599682, - |
9.31e-47 | FFCP PHASE1:Hg19::chr1:75600067..75600094,+#_2fc01b4fe5fa7634c9d426b74cc7fc43 | p2@LHX8 |
9.31e-47 | FFCP PHASE2:Hg19::chr1:75600067..75600094,+#_2fc01b4fe5fa7634c9d426b74cc7fc43 | p2@LHX8 |
4.34e-43 | FFCP PHASE1:Hg19::chr1:75602043..75602093,+#_379e0d2d4c198fdebc462c11570c09c4 | p1@LHX8 |
4.34e-43 | FFCP PHASE2:Hg19::chr1:75602043..75602093,+#_379e0d2d4c198fdebc462c11570c09c4 | p1@LHX8 |
1.34e-37 | FFCP PHASE1:Hg19::chr6:129908113..129908144,-#_7fb499d54af7a0f555c92a3a3be6cc65 | p@chr6:129908113..129908144, - |
1.34e-37 | FFCP PHASE2:Hg19::chr6:129908113..129908144,-#_7fb499d54af7a0f555c92a3a3be6cc65 | p@chr6:129908113..129908144, - |
5.69e-35 | FFCP PHASE1:Hg19::chr2:172953513..172953549,-#_49643a93e1c8481891d6aa53155a9a12 | p@chr2:172953513..172953549, - |
5.69e-35 | FFCP PHASE2:Hg19::chr2:172953513..172953549,-#_49643a93e1c8481891d6aa53155a9a12 | p@chr2:172953513..172953549, - |
1.19e-32 | FFCP PHASE2:Hg19::chr6:1389871..1389876,+#_d6ef6faef80827b15c3de0493bcefdc2 | p4@FOXF2 |
1.19e-32 | FFCP PHASE1:Hg19::chr6:1389871..1389876,+#_d6ef6faef80827b15c3de0493bcefdc2 | p4@FOXF2 |
2.68e-31 | FFCP PHASE1:Hg19::chr18:34273182..34273194,+#_80caf3ab903823203055f7aec1da18d5 | p6@FHOD3 |
2.68e-31 | FFCP PHASE2:Hg19::chr18:34273182..34273194,+#_80caf3ab903823203055f7aec1da18d5 | p6@FHOD3 |
2.78e-30 | FFCP PHASE1:Hg19::chr4:152086796..152086808,-#_0c23777be41d4e5e8e64b9164b36af06 | p18@SH3D19 |
2.78e-30 | FFCP PHASE2:Hg19::chr4:152086796..152086808,-#_0c23777be41d4e5e8e64b9164b36af06 | p18@SH3D19 |
7.33e-29 | FFCP PHASE2:Hg19::chr6:1389613..1389637,-#_2b5414c617419e14060ed3b4de6883b5 | p@chr6:1389613..1389637, - |
7.33e-29 | FFCP PHASE1:Hg19::chr6:1389613..1389637,-#_2b5414c617419e14060ed3b4de6883b5 | p@chr6:1389613..1389637, - |
2.08e-27 | FFCP PHASE1:Hg19::chr12:115777087..115777091,+#_28b84382fdbf1e61382a853e5ced297a | +, p@chr12:115777087..115777091 |
2.08e-27 | FFCP PHASE2:Hg19::chr12:115777087..115777091,+#_28b84382fdbf1e61382a853e5ced297a | p@chr12:115777087..115777091, + |
2.21e-25 | FFCP PHASE2:Hg19::chr11:7987028..7987043,-#_4dba9097502e6ad6e8a74f112c15a974 | p2@NLRP10 |
2.21e-25 | FFCP PHASE1:Hg19::chr11:7987028..7987043,-#_4dba9097502e6ad6e8a74f112c15a974 | p2@NLRP10 |
4.34e-23 | FFCP PHASE1:Hg19::chr1:75600979..75601005,+#_4e6b95766999864e5db9dfb9018bdb36 | p@chr1:75600979..75601005, + |
4.34e-23 | FFCP PHASE2:Hg19::chr1:75600979..75601005,+#_4e6b95766999864e5db9dfb9018bdb36 | p@chr1:75600979..75601005, + |
3.51e-22 | FFCP PHASE2:Hg19::chr18:65337698..65337712,+#_766a371db65db97bf25981adb699289a | p@chr18:65337698..65337712, + |
3.51e-22 | FFCP PHASE1:Hg19::chr18:65337698..65337712,+#_766a371db65db97bf25981adb699289a | p@chr18:65337698..65337712, + |
6.23e-22 | FFCP PHASE1:Hg19::chr1:31882992..31883005,+#_3e617948c6149036d7afafd342137c2b | p14@SERINC2 |
6.23e-22 | FFCP PHASE2:Hg19::chr1:31882992..31883005,+#_3e617948c6149036d7afafd342137c2b | p14@SERINC2 |
4.63e-21 | FFCP PHASE2:Hg19::chr9:96717678..96717689,-#_461373c1917def380539eb8e0f264aa7 | p2@BARX1 |
4.63e-21 | FFCP PHASE1:Hg19::chr9:96717678..96717689,-#_461373c1917def380539eb8e0f264aa7 | p2@BARX1 |
5.39e-21 | FFCP PHASE2:Hg19::chr10:28034772..28034783,-#_2b24f87f068816f7cfb9e8674eeb74ee | p4@MKX |
5.39e-21 | FFCP PHASE1:Hg19::chr10:28034772..28034783,-#_2b24f87f068816f7cfb9e8674eeb74ee | p4@MKX |
4.99e-20 | FFCP PHASE2:Hg19::chr14:37126765..37126799,+#_e205b0daef08902e8ff3c6ee268a4e92 | p2@PAX9 |
4.99e-20 | FFCP PHASE1:Hg19::chr14:37126765..37126799,+#_e205b0daef08902e8ff3c6ee268a4e92 | p2@PAX9 |
5.89e-20 | FFCP PHASE1:Hg19::chr1:75602768..75602785,+#_977750e6db63f72ac7d0864cc6761d7e | p@chr1:75602768..75602785, + |
5.89e-20 | FFCP PHASE2:Hg19::chr1:75602768..75602785,+#_977750e6db63f72ac7d0864cc6761d7e | +, p@chr1:75602768..75602785 |
6.5e-20 | FFCP PHASE2:Hg19::chr6:148761434..148761452,+#_aa6e6b0261f3c7eb4090a274614dc9fd | p11@SASH1 |
6.5e-20 | FFCP PHASE1:Hg19::chr6:148761434..148761452,+#_aa6e6b0261f3c7eb4090a274614dc9fd | p11@SASH1 |
3.13e-18 | FFCP PHASE2:Hg19::chr8:57354324..57354335,-#_a9cc7109c07806d421dc8b51f08a6d17 | p@chr8:57354324..57354335, - |
3.13e-18 | FFCP PHASE1:Hg19::chr8:57354324..57354335,-#_a9cc7109c07806d421dc8b51f08a6d17 | -, p@chr8:57354324..57354335 |
3.96e-18 | FFCP PHASE2:Hg19::chr1:83982415..83982420,+#_7291bc68ad1f2ec232438a6b90252b76 | p@chr1:83982415..83982420, + |
3.96e-18 | FFCP PHASE1:Hg19::chr1:83982415..83982420,+#_7291bc68ad1f2ec232438a6b90252b76 | p@chr1:83982415..83982420, + |
4.73e-18 | FFCP PHASE1:Hg19::chr10:24738381..24738397,+#_5168fd95183bfac8315e8a7b812c475f | p17@KIAA1217 |
4.73e-18 | FFCP PHASE2:Hg19::chr10:24738381..24738397,+#_5168fd95183bfac8315e8a7b812c475f | p17@KIAA1217 |
6.46e-18 | FFCP PHASE2:Hg19::chr4:108204864..108204887,-#_12ce675e5fb17533affedbb29f1acd46 | p3@DKK2 |
6.46e-18 | FFCP PHASE1:Hg19::chr4:108204864..108204887,-#_12ce675e5fb17533affedbb29f1acd46 | p3@DKK2 |
9.07e-18 | FFCP PHASE1:Hg19::chr1:75602749..75602758,+#_0db8c72681a480e9f90258de78a001df | p@chr1:75602749..75602758, + |
9.07e-18 | FFCP PHASE2:Hg19::chr1:75602749..75602758,+#_0db8c72681a480e9f90258de78a001df | p@chr1:75602749..75602758, + |
9.07e-18 | FFCP PHASE1:Hg19::chr4:14094655..14094663,+#_0db8c72681a480e9f90258de78a001df | p@chr4:14094655..14094663, + |
9.07e-18 | FFCP PHASE2:Hg19::chr4:14094655..14094663,+#_0db8c72681a480e9f90258de78a001df | p@chr4:14094655..14094663, + |
9.07e-18 | FFCP PHASE1:Hg19::chr1:75602005..75602017,+#_0db8c72681a480e9f90258de78a001df | p@chr1:75602005..75602017, + |
9.07e-18 | FFCP PHASE2:Hg19::chr1:75602005..75602017,+#_0db8c72681a480e9f90258de78a001df | p@chr1:75602005..75602017, + |
9.28e-18 | FFCP PHASE2:Hg19::chr6:116479897..116479942,-#_dd18ac16e05c5ee3a96e5e33296523a8 | p2@COL10A1 |
9.28e-18 | FFCP PHASE1:Hg19::chr6:116479897..116479942,-#_dd18ac16e05c5ee3a96e5e33296523a8 | p2@COL10A1 |
1.22e-17 | FFCP PHASE1:Hg19::chr10:15761954..15761965,-#_185801a1f5011fbc24d5b7da86cb4927 | p7@ITGA8 |
1.22e-17 | FFCP PHASE2:Hg19::chr10:15761954..15761965,-#_185801a1f5011fbc24d5b7da86cb4927 | p7@ITGA8 |
1.85e-17 | FFCP PHASE2:Hg19::chr1:241577071..241577081,+#_530abf622f593964ef070205470dfab7 | p@chr1:241577071..241577081, + |
1.85e-17 | FFCP PHASE1:Hg19::chr1:241577071..241577081,+#_530abf622f593964ef070205470dfab7 | p@chr1:241577071..241577081, + |
3.81e-17 | FFCP PHASE2:Hg19::chr6:1389647..1389668,-#_573cd7f324f9b583432ed2e2e4245672 | p@chr6:1389647..1389668, - |
3.81e-17 | FFCP PHASE1:Hg19::chr6:1389647..1389668,-#_573cd7f324f9b583432ed2e2e4245672 | p@chr6:1389647..1389668, - |
4.15e-17 | FFCP PHASE1:Hg19::chr1:68257383..68257394,-#_52d6aa2f0658c60b7c2c842958665f6b | p@chr1:68257383..68257394, - |
4.15e-17 | FFCP PHASE2:Hg19::chr1:68257383..68257394,-#_52d6aa2f0658c60b7c2c842958665f6b | p@chr1:68257383..68257394, - |
6.03e-17 | FFCP PHASE2:Hg19::chr6:148761457..148761478,+#_6f725de4e60ed802bf070ca4fd0de318 | p8@SASH1 |
6.03e-17 | FFCP PHASE1:Hg19::chr6:148761457..148761478,+#_6f725de4e60ed802bf070ca4fd0de318 | p8@SASH1 |
2.11e-16 | FFCP PHASE2:Hg19::chr4:47857451..47857469,-#_3312e6cfccd86e03aac041158c6531d8 | p@chr4:47857451..47857469, - |
2.11e-16 | FFCP PHASE1:Hg19::chr4:47857451..47857469,-#_3312e6cfccd86e03aac041158c6531d8 | p@chr4:47857451..47857469, - |
2.59e-16 | FFCP PHASE2:Hg19::chr15:33406335..33406350,-#_bb8738ac6dfc320131ae1149d4b28e3b | p@chr15:33406335..33406350, - |
2.59e-16 | FFCP PHASE1:Hg19::chr15:33406335..33406350,-#_bb8738ac6dfc320131ae1149d4b28e3b | p@chr15:33406335..33406350, - |
3.17e-16 | FFCP PHASE1:Hg19::chr14:37126870..37126882,+#_299809e2dba403a1d55f27dcaedfdb89 | p1@ENST00000555639 |
3.17e-16 | FFCP PHASE2:Hg19::chr14:37126870..37126882,+#_299809e2dba403a1d55f27dcaedfdb89 | p1@ENST00000555639 |
4.64e-16 | FFCP PHASE1:Hg19::chr18:34273196..34273214,+#_75f6336a96b46cd26640f4158094bfdb | p2@FHOD3 |
4.64e-16 | FFCP PHASE2:Hg19::chr18:34273196..34273214,+#_75f6336a96b46cd26640f4158094bfdb | p2@FHOD3 |
7.23e-16 | FFCP PHASE2:Hg19::chr3:37204870..37204881,-#_fa6212d2d2afb85828d7ac852909f6ad | p@chr3:37204870..37204881, - |
7.23e-16 | FFCP PHASE1:Hg19::chr3:37204870..37204881,-#_fa6212d2d2afb85828d7ac852909f6ad | p@chr3:37204870..37204881, - |
1.02e-15 | FFCP PHASE1:Hg19::chr2:12246664..12246694,+#_e029331023a882eeda8f903bd53cf99d | p1@ENST00000449986 |
1.02e-15 | FFCP PHASE2:Hg19::chr2:12246664..12246694,+#_e029331023a882eeda8f903bd53cf99d | p1@ENST00000449986 |
1.12e-15 | FFCP PHASE1:Hg19::chr4:152090554..152090566,+#_3889b98fd0800a10fd217a59856e6f4e | p@chr4:152090554..152090566, + |
1.12e-15 | FFCP PHASE2:Hg19::chr4:152090554..152090566,+#_3889b98fd0800a10fd217a59856e6f4e | p@chr4:152090554..152090566, + |
1.13e-15 | FFCP PHASE1:Hg19::chr18:59685444..59685459,-#_4393fe8f83aeb347309481bd6e5831b6 | p@chr18:59685444..59685459, - |
1.13e-15 | FFCP PHASE2:Hg19::chr8:57354211..57354220,+#_4393fe8f83aeb347309481bd6e5831b6 | +, p@chr8:57354211..57354220 |
1.13e-15 | FFCP PHASE1:Hg19::chr8:57354211..57354220,+#_4393fe8f83aeb347309481bd6e5831b6 | p@chr8:57354211..57354220, + |
1.13e-15 | FFCP PHASE2:Hg19::chr18:59685444..59685459,-#_4393fe8f83aeb347309481bd6e5831b6 | p@chr18:59685444..59685459, - |
1.31e-15 | FFCP PHASE2:Hg19::chr1:75600318..75600329,+#_fe82443a209b961a56426b4862485939 | p4@LHX8 |
1.31e-15 | FFCP PHASE1:Hg19::chr4:13890014..13890023,+#_fe82443a209b961a56426b4862485939 | p@chr4:13890014..13890023, + |
1.31e-15 | FFCP PHASE2:Hg19::chr4:13890014..13890023,+#_fe82443a209b961a56426b4862485939 | p@chr4:13890014..13890023, + |
1.31e-15 | FFCP PHASE1:Hg19::chr1:75600318..75600329,+#_fe82443a209b961a56426b4862485939 | p4@LHX8 |
2.33e-15 | FFCP PHASE1:Hg19::chr10:28033614..28033628,-#_b4880690db1604ab36c0453f7666a734 | p@chr10:28033614..28033628, - |
2.33e-15 | FFCP PHASE2:Hg19::chr10:28033614..28033628,-#_b4880690db1604ab36c0453f7666a734 | p@chr10:28033614..28033628, - |
4.6e-15 | FFCP PHASE2:Hg19::chr8:57354251..57354262,-#_0653b56faca2fafdf3fab7dcc951906f | p@chr8:57354251..57354262, - |
4.6e-15 | FFCP PHASE1:Hg19::chr8:57354251..57354262,-#_0653b56faca2fafdf3fab7dcc951906f | p@chr8:57354251..57354262, - |
5.3e-15 | FFCP PHASE2:Hg19::chr7:134005080..134005095,-#_5db111254dacf1dd580cbbed411cd570 | p@chr7:134005080..134005095, - |
5.3e-15 | FFCP PHASE1:Hg19::chr7:134005080..134005095,-#_5db111254dacf1dd580cbbed411cd570 | p@chr7:134005080..134005095, - |
5.54e-15 | FFCP PHASE2:Hg19::chr17:78808278..78808309,-#_3d7952b4333758c80a8be6b8d2b0b5ad | p@chr17:78808278..78808309, - |
5.54e-15 | FFCP PHASE1:Hg19::chr17:78808278..78808309,-#_3d7952b4333758c80a8be6b8d2b0b5ad | p@chr17:78808278..78808309, - |