Personal tools

UBERON:0001871

From FANTOM5_SSTAR

Jump to: navigation, search

Name:temporal lobe
Namespace:FANTOM
Definition:"Temporal lobe is the ventrolateral lobe of five lobes comprising each cerebral hemisphere. It is bounded dorsally by the lateral fissure and posteriorly by an arbitrary border shared with the occipital lobe." [Wikipedia:Temporal_lobe]
Xrefs:
links:

BM:Tel-Cx-Te
BTO:0001355
EFO:0000917
EMAPA:18797
EV:0100169
FMA:61825
GAID:635
[ Gray730.png Gray730.png]
[ 200px-Gray730.png 200px-Gray730.png]
MA:0000941
MAT:0000508
MESH:A.08.186.211.730.885.213.863
ncithesaurus:Temporal_Lobe
NIF_GrossAnatomy:birnlex_1160
OpenCyc:Mx4rwQLi-ZwpEbGdrcN5Y29ycA

SCTID:180921000
Synonyms: "lobus temporalis" RELATED LATIN [Wikipedia:Temporal_lobe]
"temporal cortex" EXACT []
"temporal neocortex" EXACT [DHB:TCx]
Alt_id: UBERON:FMA_61825-MA_0000941
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0016526(lobe of cerebral hemisphere)
part_of:UBERON:0001950(neocortex)



Children

derives from:FF:0010031 (human temporal lobe - adult sample),FF:0010071 (human temporal lobe - fetal sample)
part of:UBERON:0001876 (amygdala),UBERON:0002771 (middle temporal gyrus),FF:0010071 (human temporal lobe - fetal sample),UBERON:0016538 (cortex of temporal lobe)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001871 (temporal lobe), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
7.5e-64FFCP PHASE2:Hg19::chr1:112532954..112532966,-#_748466ef9503a721743328361a204abep@chr1:112532954..112532966, -
7.5e-64FFCP PHASE1:Hg19::chr1:112532954..112532966,-#_748466ef9503a721743328361a204abep@chr1:112532954..112532966, -
4.63e-63FFCP PHASE2:Hg19::chr1:87810993..87811005,+#_bbd6c4f91e197d2ec5f914cd1e5da5a5p@chr1:87810993..87811005, +
4.63e-63FFCP PHASE1:Hg19::chr1:87810993..87811005,+#_bbd6c4f91e197d2ec5f914cd1e5da5a5p@chr1:87810993..87811005, +
2.13e-59FFCP PHASE2:Hg19::chr20:44881095..44881140,-#_cba86f6900194e8fa3d6982f55cdb7c4p@chr20:44881095..44881140, -
2.13e-59FFCP PHASE1:Hg19::chr20:44881095..44881140,-#_cba86f6900194e8fa3d6982f55cdb7c4p@chr20:44881095..44881140, -
4.76e-57FFCP PHASE1:Hg19::chr7:44282202..44282211,-#_d6457bd7b63e3f64881a7320b467f8f3p22@CAMK2B
4.76e-57FFCP PHASE2:Hg19::chr20:23357397..23357407,-#_d6457bd7b63e3f64881a7320b467f8f3p@chr20:23357397..23357407, -
4.76e-57FFCP PHASE2:Hg19::chr1:177001748..177001753,-#_d6457bd7b63e3f64881a7320b467f8f3p16@ASTN1
4.76e-57FFCP PHASE2:Hg19::chr7:44282202..44282211,-#_d6457bd7b63e3f64881a7320b467f8f3p22@CAMK2B
4.76e-57FFCP PHASE1:Hg19::chr11:63486158..63486182,+#_d6457bd7b63e3f64881a7320b467f8f3p@chr11:63486158..63486182, +
4.76e-57FFCP PHASE1:Hg19::chr16:24372933..24372944,+#_d6457bd7b63e3f64881a7320b467f8f3p@chr16:24372933..24372944, +
4.76e-57FFCP PHASE1:Hg19::chr1:177001748..177001753,-#_d6457bd7b63e3f64881a7320b467f8f3p16@ASTN1
4.76e-57FFCP PHASE2:Hg19::chr16:24372933..24372944,+#_d6457bd7b63e3f64881a7320b467f8f3p@chr16:24372933..24372944, +
4.76e-57FFCP PHASE1:Hg19::chr5:161530948..161530957,+#_d6457bd7b63e3f64881a7320b467f8f3p@chr5:161530948..161530957, +
4.76e-57FFCP PHASE1:Hg19::chr20:23357397..23357407,-#_d6457bd7b63e3f64881a7320b467f8f3p@chr20:23357397..23357407, -
4.76e-57FFCP PHASE2:Hg19::chr11:63486158..63486182,+#_d6457bd7b63e3f64881a7320b467f8f3p@chr11:63486158..63486182, +
4.76e-57FFCP PHASE2:Hg19::chr5:161530948..161530957,+#_d6457bd7b63e3f64881a7320b467f8f3p@chr5:161530948..161530957, +
2.5e-54FFCP PHASE1:Hg19::chr5:149601723..149601751,-#_e6190d66ea423de0e66990324d680798p@chr5:149601723..149601751, -
2.5e-54FFCP PHASE2:Hg19::chr8:89554909..89554920,+#_e6190d66ea423de0e66990324d680798p3@ENST00000518631
2.5e-54FFCP PHASE2:Hg19::chr5:149601723..149601751,-#_e6190d66ea423de0e66990324d680798p@chr5:149601723..149601751, -
2.5e-54FFCP PHASE1:Hg19::chr8:89554909..89554920,+#_e6190d66ea423de0e66990324d680798p3@ENST00000518631
3.89e-54FFCP PHASE2:Hg19::chr9:101052594..101052627,-#_f8cd889b62f7b7f321a2c4db6180bd8dp12@GABBR2
3.89e-54FFCP PHASE1:Hg19::chr9:101052594..101052627,-#_f8cd889b62f7b7f321a2c4db6180bd8dp12@GABBR2
3.85e-51FFCP PHASE1:Hg19::chr11:74047383..74047406,-#_efe2eb2694d17bb751163fbfcac812d2p@chr11:74047383..74047406, -
3.85e-51FFCP PHASE2:Hg19::chr11:74047383..74047406,-#_efe2eb2694d17bb751163fbfcac812d2p@chr11:74047383..74047406, -
8.72e-51FFCP PHASE1:Hg19::chr16:19183650..19183662,+#_fca56549ee4501429d685dc8321bd05bp8@SYT17
8.72e-51FFCP PHASE2:Hg19::chr16:19183650..19183662,+#_fca56549ee4501429d685dc8321bd05bp8@SYT17
1.22e-50FFCP PHASE2:Hg19::chr9:10612907..10612918,-#_c9b9caf56e65870c3232f52132cf251ap17@PTPRD
1.22e-50FFCP PHASE1:Hg19::chr9:10612907..10612918,-#_c9b9caf56e65870c3232f52132cf251ap17@PTPRD
1.5e-50FFCP PHASE1:Hg19::chr22:42393379..42393386,+#_49db4496759ebb4ba27306e5c06afc58p@chr22:42393379..42393386, +
1.5e-50FFCP PHASE2:Hg19::chr22:42393379..42393386,+#_49db4496759ebb4ba27306e5c06afc58p@chr22:42393379..42393386, +
3.65e-50FFCP PHASE1:Hg19::chr3:68056440..68056444,+#_5a07246b8d5dfd14279254cf38e98ccdp@chr3:68056440..68056444, +
3.65e-50FFCP PHASE2:Hg19::chr3:68056440..68056444,+#_5a07246b8d5dfd14279254cf38e98ccdp@chr3:68056440..68056444, +
1.37e-49FFCP PHASE2:Hg19::chr7:154002357..154002364,+#_23c863a8916bfd39ccbcd924159797f0p18@DPP6
1.37e-49FFCP PHASE1:Hg19::chr7:154002357..154002364,+#_23c863a8916bfd39ccbcd924159797f0p18@DPP6
8.56e-48FFCP PHASE2:Hg19::chr10:10504367..10504380,+#_a2b66eea4796738fd6ffbf8dbd5d90c1p@chr10:10504367..10504380, +
8.56e-48FFCP PHASE1:Hg19::chr10:10504367..10504380,+#_a2b66eea4796738fd6ffbf8dbd5d90c1p@chr10:10504367..10504380, +
9.31e-48FFCP PHASE2:Hg19::chr17:1029008..1029023,-#_cd8a7caa02f2c74d820909cc48300c7dp29@ABR
9.31e-48FFCP PHASE1:Hg19::chr17:1029008..1029023,-#_cd8a7caa02f2c74d820909cc48300c7dp29@ABR
2.01e-47FFCP PHASE1:Hg19::chr2:136399311..136399323,+#_c97e86d9d68b67b251eca3583d16053dp@chr2:136399311..136399323, +
2.01e-47FFCP PHASE2:Hg19::chr2:136399311..136399323,+#_c97e86d9d68b67b251eca3583d16053dp@chr2:136399311..136399323, +
3.57e-47FFCP PHASE2:Hg19::chr22:33454349..33454350,-#_f0a9de6427fcea42b980035f59c36460p6@SYN3
3.57e-47FFCP PHASE1:Hg19::chr22:33454349..33454350,-#_f0a9de6427fcea42b980035f59c36460p6@SYN3
4.32e-47FFCP PHASE1:Hg19::chr11:20792354..20792385,+#_9fe32e546d1b2433ab99b0decca46be6p3@NELL1
4.32e-47FFCP PHASE2:Hg19::chr11:20792354..20792385,+#_9fe32e546d1b2433ab99b0decca46be6p3@NELL1
1.25e-45FFCP PHASE1:Hg19::chr3:113023157..113023168,-#_b5fd7f46779a6f78a83b3ae7cdb4a1c6p4@WDR52
1.25e-45FFCP PHASE2:Hg19::chr3:113023157..113023168,-#_b5fd7f46779a6f78a83b3ae7cdb4a1c6p4@WDR52
1.41e-45FFCP PHASE1:Hg19::chr11:99941186..99941205,+#_f34fa235d986f97ff446c7beff67bce6p5@CNTN5
1.41e-45FFCP PHASE2:Hg19::chr11:99941186..99941205,+#_f34fa235d986f97ff446c7beff67bce6p5@CNTN5
2.5e-45FFCP PHASE2:Hg19::chr10:116887377..116887393,+#_1526ed818014beced436f1bab54df1b9p@chr10:116887377..116887393, +
2.5e-45FFCP PHASE1:Hg19::chr10:116887377..116887393,+#_1526ed818014beced436f1bab54df1b9p@chr10:116887377..116887393, +
8.57e-45FFCP PHASE2:Hg19::chr17:1028996..1029007,-#_3297587e148eaf36e9092af682593ef0p30@ABR
8.57e-45FFCP PHASE1:Hg19::chr17:1028996..1029007,-#_3297587e148eaf36e9092af682593ef0p30@ABR
1.93e-44FFCP PHASE2:Hg19::chr2:163696032..163696047,-#_993ecbba29215708e98d681fb4bfc37ap@chr2:163696032..163696047, -
1.93e-44FFCP PHASE1:Hg19::chr2:163696032..163696047,-#_993ecbba29215708e98d681fb4bfc37ap@chr2:163696032..163696047, -
5.21e-44FFCP PHASE2:Hg19::chr1:6219455..6219466,+#_1b618c05e25e40f792b491011706803ap@chr1:6219455..6219466, +
5.21e-44FFCP PHASE1:Hg19::chr1:6219455..6219466,+#_1b618c05e25e40f792b491011706803ap@chr1:6219455..6219466, +
6.76e-44FFCP PHASE2:Hg19::chr13:33780283..33780296,-#_cfd69cb2740d64e4df0dd7d8a2f24e21p11@STARD13
6.76e-44FFCP PHASE1:Hg19::chr13:33780283..33780296,-#_cfd69cb2740d64e4df0dd7d8a2f24e21p11@STARD13
3.87e-43FFCP PHASE2:Hg19::chr6:80131778..80131795,+#_4fb7b2c47708db5d7ce7f51fe600ccccp@chr6:80131778..80131795, +
3.87e-43FFCP PHASE1:Hg19::chr6:80131778..80131795,+#_4fb7b2c47708db5d7ce7f51fe600ccccp@chr6:80131778..80131795, +
5.22e-43FFCP PHASE2:Hg19::chr13:67802549..67802564,-#_36c52c2228ec340611ffcb3ee1e3080cp1@AB384392
5.22e-43FFCP PHASE1:Hg19::chr13:67802549..67802564,-#_36c52c2228ec340611ffcb3ee1e3080cp1@AB384392
6.03e-43FFCP PHASE1:Hg19::chr10:102089952..102089973,-#_efc627821515cec69665f62acfee3838p2@PKD2L1
6.03e-43FFCP PHASE2:Hg19::chr10:102089952..102089973,-#_efc627821515cec69665f62acfee3838p2@PKD2L1
1.07e-42FFCP PHASE2:Hg19::chr6:69345368..69345379,+#_9f62b199ebb6a1e4e4b0ea28a10ecf77p7@BAI3
1.07e-42FFCP PHASE1:Hg19::chr13:53938493..53938506,+#_9f62b199ebb6a1e4e4b0ea28a10ecf77p@chr13:53938493..53938506, +
1.07e-42FFCP PHASE1:Hg19::chr6:69345368..69345379,+#_9f62b199ebb6a1e4e4b0ea28a10ecf77p7@BAI3
1.07e-42FFCP PHASE2:Hg19::chr13:53938493..53938506,+#_9f62b199ebb6a1e4e4b0ea28a10ecf77p@chr13:53938493..53938506, +
1.77e-42FFCP PHASE2:Hg19::chr3:131756595..131756614,-#_6697be7ae545281bae7ff613639fdb4ap4@CPNE4
1.77e-42FFCP PHASE1:Hg19::chr3:131756595..131756614,-#_6697be7ae545281bae7ff613639fdb4ap4@CPNE4
2.13e-42FFCP PHASE2:Hg19::chr12:49932864..49932871,+#_4577fa1f371c3bd5d7d9f1f50885505ap3@KCNH3
2.13e-42FFCP PHASE1:Hg19::chr12:49932864..49932871,+#_4577fa1f371c3bd5d7d9f1f50885505ap3@KCNH3
2.72e-42FFCP PHASE2:Hg19::chr19:19356203..19356221,+#_90603eec0cebc9a26cd9573f6d42ad89p@chr19:19356203..19356221, +
2.72e-42FFCP PHASE1:Hg19::chr19:19356203..19356221,+#_90603eec0cebc9a26cd9573f6d42ad89p@chr19:19356203..19356221, +
2.92e-42FFCP PHASE2:Hg19::chr7:107302587..107302611,-#_f87e9c591abf6f69f8e47ea100983844p1@ENST00000449741
2.92e-42FFCP PHASE1:Hg19::chr7:107302587..107302611,-#_f87e9c591abf6f69f8e47ea100983844p1@ENST00000449741
3.86e-42FFCP PHASE2:Hg19::chr11:62702172..62702193,+#_906d016b2c3741094a0ae4a011e145d9p@chr11:62702172..62702193, +
3.86e-42FFCP PHASE1:Hg19::chr11:62702172..62702193,+#_906d016b2c3741094a0ae4a011e145d9p@chr11:62702172..62702193, +
4.19e-42FFCP PHASE2:Hg19::chr12:131201033..131201041,-#_fc188ef9094b391eec99b707bdea5724p3@RIMBP2
4.19e-42FFCP PHASE1:Hg19::chr12:131201033..131201041,-#_fc188ef9094b391eec99b707bdea5724p3@RIMBP2
4.57e-42FFCP PHASE2:Hg19::chr20:3176551..3176567,-#_91ec7edca2c232b1ad8421ba95f8d64ep@chr20:3176551..3176567, -
4.57e-42FFCP PHASE1:Hg19::chr1:59011498..59011517,+#_91ec7edca2c232b1ad8421ba95f8d64ep@chr1:59011498..59011517, +
4.57e-42FFCP PHASE1:Hg19::chr20:3176551..3176567,-#_91ec7edca2c232b1ad8421ba95f8d64ep@chr20:3176551..3176567, -
4.57e-42FFCP PHASE2:Hg19::chr1:59011498..59011517,+#_91ec7edca2c232b1ad8421ba95f8d64ep@chr1:59011498..59011517, +
6.98e-42FFCP PHASE1:Hg19::chr14:76241843..76241862,+#_2ae6a3c4bed591bc0b84091f163c232ep@chr14:76241843..76241862, +
6.98e-42FFCP PHASE2:Hg19::chr14:76241843..76241862,+#_2ae6a3c4bed591bc0b84091f163c232ep@chr14:76241843..76241862, +
7.59e-42FFCP PHASE2:Hg19::chr7:55433055..55433064,+#_39a33ec6d1a9f1d9f6ddfd43fca7d534p12@LANCL2
7.59e-42FFCP PHASE1:Hg19::chr7:55433055..55433064,+#_39a33ec6d1a9f1d9f6ddfd43fca7d534p12@LANCL2
8.85e-42FFCP PHASE1:Hg19::chr20:34810219..34810231,+#_6fc2a3f482c63864c5519b5ce171fab7p@chr20:34810219..34810231, +
8.85e-42FFCP PHASE2:Hg19::chr20:34810219..34810231,+#_6fc2a3f482c63864c5519b5ce171fab7p@chr20:34810219..34810231, +
8.99e-42FFCP PHASE2:Hg19::chr7:38574745..38574756,-#_95b0bfd582297430425b611b4654eaf0p@chr7:38574745..38574756, -
8.99e-42FFCP PHASE1:Hg19::chr7:38574745..38574756,-#_95b0bfd582297430425b611b4654eaf0p@chr7:38574745..38574756, -
1.06e-41FFCP PHASE2:Hg19::chr12:13708919..13708933,-#_33b4e20e034a438234cef88e6c000896p@chr12:13708919..13708933, -
1.06e-41FFCP PHASE1:Hg19::chr12:13708919..13708933,-#_33b4e20e034a438234cef88e6c000896p@chr12:13708919..13708933, -
1.34e-41FFCP PHASE2:Hg19::chr12:120240554..120240562,-#_3ffc07a2947989dbcf92684104761bb7p@chr12:120240554..120240562, -
1.34e-41FFCP PHASE1:Hg19::chr12:120240554..120240562,-#_3ffc07a2947989dbcf92684104761bb7p@chr12:120240554..120240562, -
1.49e-41FFCP PHASE1:Hg19::chr5:149602704..149602720,-#_1ae5bbbdfe26ae64d589e3166a5244e3p@chr5:149602704..149602720, -
1.49e-41FFCP PHASE2:Hg19::chr5:149602704..149602720,-#_1ae5bbbdfe26ae64d589e3166a5244e3p@chr5:149602704..149602720, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0001871&oldid=3277307"